RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PRCDQ00LT1 54 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 COX19Q49B96 90 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 BHLHA15Q7RTS1 189 aaPredicted RBP12.27□□□□□ -0.44
LINC00839-202ENST00000429940 FDCSPQ8NFU4 85 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 RCHY1Q96PM5 261 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 RNF2Q99496 336 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 NRN1Q9NPD7 142 aa12.27□□□□□ -0.44
LINC00839-202ENST00000429940 AMY1AP04745 511 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 OR5G3P0C626 314 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 PMCHP20382 165 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 TAS2R45P59539 299 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
LINC00839-202ENST00000429940 POU2AF1Q16633 256 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 FAM201AQ5SY85 155 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 IBA57Q5T440 356 aaKnown RBP12.27□□□□□ -0.45
LINC00839-202ENST00000429940 Q8N976 141 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF71Q9NQZ8 489 aaPredicted RBP12.27□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF257Q9Y2Q1 563 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 PRR14LQ5THK1 2151 aa12.27□□□□□ -0.45
LINC00839-202ENST00000429940 A0A1W2PS18 150 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 SPRY3O43610 288 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF253O75346 499 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 LHBP01229 141 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
LINC00839-202ENST00000429940 LPAR2Q9HBW0 351 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 SERTAD4Q9NUC0 356 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 UPK2O00526 184 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 IGLV2-8P01709 118 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 SRIP30626 198 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 PPOXP50336 477 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF83P51522 516 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 GAGE1Q13065 139 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 IGF2BP2-AS1Q96M15 143 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 C19orf24Q9BVV8 132 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 NCOR1P1Q9H4R4 102 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
LINC00839-202ENST00000429940 SMIM27A0A1W2PRY6 76 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 HLA-DQA1P01909 254 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 RTL8BQ17RB0 113 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 DUX4L9Q6RFH8 374 aaPredicted RBP12.25□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF439Q8NDP4 499 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 ITLN1Q8WWA0 313 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 SARAFQ96BY9 339 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 SLC25A15Q9Y619 301 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 BMPR1BO00238 502 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 NPSP0C0P6 89 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 VHLLQ6RSH7 139 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 OR9G1Q8NH87 305 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 CDC42EP3Q9UKI2 254 aa12.25□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
LINC00839-202ENST00000429940 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 KLF3P57682 345 aaPredicted RBP12.24□□□□□ -0.45
LINC00839-202ENST00000429940 MLANAQ16655 118 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 SPATA45Q537H7 98 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 C2orf83Q53S99 150 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 PNKDQ8N490 385 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 STARD4Q96DR4 205 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 SLC35D1Q9NTN3 355 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 SVILO95425 2214 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 PTPRQQ9UMZ3 2332 aa12.24□□□□□ -0.45
LINC00839-202ENST00000429940 SRRM4A7MD48 611 aaKnown RBP12.23□□□□□ -0.45
LINC00839-202ENST00000429940 M0R1B8 84 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 APCSP02743 223 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 CTRLP40313 264 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 NHLRC2Q8NBF2 726 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 SLC25A33Q9BSK2 321 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 HEATR1Q9H583 2144 aaKnown RBP12.23□□□□□ -0.45
LINC00839-202ENST00000429940 CA1P00915 261 aaPredicted RBP12.23□□□□□ -0.45
LINC00839-202ENST00000429940 CT45A6P0DMU7 189 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 CT45A5P0DMU8 189 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 CT45A7P0DMV0 189 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
LINC00839-202ENST00000429940 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 MSRB2Q9Y3D2 182 aa12.23□□□□□ -0.45
LINC00839-202ENST00000429940 IZUMO1RA6ND01 250 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 RNASE2P10153 161 aaKnown RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 ATP5IP56385 69 aaPredicted RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 OR1L8Q8NGR8 309 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 MMP23AO75900 390 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 UBE2L3P68036 154 aaKnown RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 CD69Q07108 199 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 FAM19A2Q8N3H0 131 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 DEFB108BQ8NET1 73 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 OR10W1Q8NGF6 305 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 FAM222BQ8WU58 562 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 TSKUQ8WUA8 353 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 SLC25A2Q9BXI2 301 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 MRPL32Q9BYC8 188 aaKnown RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
LINC00839-202ENST00000429940 ZNRD1Q9P1U0 126 aa12.22□□□□□ -0.45
LINC00839-202ENST00000429940 TRAV5A0A0B4J249 113 aa12.21□□□□□ -0.45
LINC00839-202ENST00000429940 CRYABP02511 175 aaKnown RBP12.21□□□□□ -0.45
LINC00839-202ENST00000429940 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
LINC00839-202ENST00000429940 SAA1P0DJI8 122 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms