RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 MDKP21741 143 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 CRIP2P52943 208 aaPredicted RBP10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 ASPHD1Q5U4P2 390 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 ETFRF1Q6IPR1 90 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMEM86BQ8N661 226 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 SIGLECL1Q8N7X8 197 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 LFNGQ8NES3 379 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMED6Q8WW62 240 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 TAF15Q92804 592 aaKnown RBP eCLIP10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 WNT10AQ9GZT5 417 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 PARP11Q9NR21 331 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
HMGB3P4-201ENST00000428776 ATP6V0E1O15342 81 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 MPDU1O75352 247 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 FBXO24O75426 580 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 LY6G6DO95868 133 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 IGHG2P01859 326 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 ATP6V0CP27449 155 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 MFAP2P55001 183 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 ARSJQ5FYB0 599 aaPredicted RBP10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 UNQ5815/PRO19632Q6UWF5 114 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 TREML4Q6UXN2 200 aa10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 PSMG3Q9BT73 122 aaPredicted RBP10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 SONP18583 2426 aaKnown RBP10.02□□□□□ -0.81
HMGB3P4-201ENST00000428776 SETXQ7Z333 2677 aaKnown RBP10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SMCO3A2RU48 225 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SH2D7A6NKC9 451 aaPredicted RBP10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 LINC01548A6NM66 108 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 IGF1P05019 195 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 FGF7P21781 194 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 OPRK1P41145 380 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 RAB14P61106 215 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 BLCAPP62952 87 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 GAMTQ14353 236 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 C9orf152Q5JTZ5 239 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 BTNL8Q6UX41 500 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SLC16A13Q7RTY0 426 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SLC35E3Q7Z769 313 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 CENPVQ7Z7K6 275 aaPredicted RBP10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 LRRC20Q8TCA0 184 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 MISP3Q96FF7 219 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SLC35E1Q96K37 410 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SMR3AQ99954 134 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SH3BGRL3Q9H299 93 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 SLC25A32Q9H2D1 315 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 CDC42EP3Q9UKI2 254 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 TIMM9Q9Y5J7 89 aa10.01□□□□□ -0.81
HMGB3P4-201ENST00000428776 C17orf112F2Z3M2 114 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 HIST1H1BP16401 226 aaKnown RBP10□□□□□ -0.81
HMGB3P4-201ENST00000428776 SERF2P84101 59 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 RUNX1Q01196 453 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 AKR1C1Q04828 323 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 RAB31Q13636 194 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 MLANAQ16655 118 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 ECSCRQ19T08 205 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 KLK9Q2XQG4 91 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 TEPPQ6URK8 271 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 C19orf35Q6ZS72 473 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 ZNF709Q8N972 641 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 OR5T1Q8NG75 326 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 RNF141Q8WVD5 230 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 FNDC4Q9H6D8 234 aaPredicted RBP10□□□□□ -0.81
HMGB3P4-201ENST00000428776 TNFRSF19Q9NS68 423 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 THYN1Q9P016 225 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 ZNF580Q9UK33 172 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 KLK9Q9UKQ9 250 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 LSM4Q9Y4Z0 139 aaKnown RBP10□□□□□ -0.81
HMGB3P4-201ENST00000428776 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
HMGB3P4-201ENST00000428776 HIVEP1P15822 2718 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 TRAV41A0A0B4J266 112 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 UMAD1C9J7I0 102 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 AP4M1O00189 453 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 SOX15O60248 233 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 FAM157CP0CG43 387 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 SULT1A2P50226 295 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 RAB5CP51148 216 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 C19orf54Q5BKX5 351 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 FAM74A1Q5RGS3 127 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 RSG1Q9BU20 258 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 ZNF469Q96JG9 3925 aaPredicted RBP9.99□□□□□ -0.81
HMGB3P4-201ENST00000428776 G3V318 75 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 TRIM77I1YAP6 450 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 I3L2K1 104 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 MT-CO2P00403 227 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 SRD5A1P18405 259 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
HMGB3P4-201ENST00000428776 TMEM182Q6ZP80 229 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms