RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 LYSMD2Q8IV50 215 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 OR10C1Q96KK4 312 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 FXYD6Q9H0Q3 95 aa12.11□□□□□ -0.47
VARS-216ENST00000428445 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 I3L2K1 104 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 UCP3P55916 312 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 RBMS2Q15434 407 aaKnown RBP12.1□□□□□ -0.47
VARS-216ENST00000428445 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 SAMD12Q8N8I0 201 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 PINX1Q96BK5 328 aaKnown RBP12.1□□□□□ -0.47
VARS-216ENST00000428445 KIAA1109Q2LD37 5005 aa12.1□□□□□ -0.47
VARS-216ENST00000428445 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 C15orf61A6NNL5 157 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 MT-CO2P00403 227 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 CA1P00915 261 aaPredicted RBP12.09□□□□□ -0.47
VARS-216ENST00000428445 TSPAN5P62079 268 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 SPINK9Q5DT21 86 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 TCF24Q7RTU0 167 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 ZNF114Q8NC26 417 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 ST8SIA2Q92186 375 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 NXF2Q9GZY0 626 aaKnown RBP12.09□□□□□ -0.47
VARS-216ENST00000428445 SCPEP1Q9HB40 452 aa12.09□□□□□ -0.47
VARS-216ENST00000428445 IGKV1-39P01597 117 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 IGKV1D-39P04432 117 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 IFNA4P05014 189 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 HRH1P35367 487 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 DEFB131AP59861 70 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
VARS-216ENST00000428445 PAFAH1B2P68402 229 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
VARS-216ENST00000428445 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 H2BFWTQ7Z2G1 175 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 OR4A16Q8NH70 328 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 VCX3AQ9NNX9 186 aa12.08□□□□□ -0.48
VARS-216ENST00000428445 PCLOQ9Y6V0 5065 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 DFFBO76075 338 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 APOA1P02647 267 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 HLA-DMAP28067 261 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 TOMM20LQ6UXN7 152 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 YIPF6Q96EC8 236 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 MS4A6AQ9H2W1 248 aa12.07□□□□□ -0.48
VARS-216ENST00000428445 FAT2Q9NYQ8 4349 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 DNAH2Q9P225 4427 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 A0A087WXM4 84 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 IGLL5B9A064 214 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 ST8SIA3O43173 380 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 TBC1D26Q86UD7 250 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 C2CD4CQ8TF44 421 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 C11orf68Q9H3H3 251 aaKnown RBP12.06□□□□□ -0.48
VARS-216ENST00000428445 APLNQ9ULZ1 77 aa12.06□□□□□ -0.48
VARS-216ENST00000428445 INS-IGF2F8WCM5 200 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 DNASE2O00115 360 aaPredicted RBP12.05□□□□□ -0.48
VARS-216ENST00000428445 GNG7O60262 68 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 RCVRNP35243 200 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 NPBWR1P48145 328 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 RPL11P62913 178 aaKnown RBP12.05□□□□□ -0.48
VARS-216ENST00000428445 TMEM187Q14656 261 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 ZNF486Q96H40 463 aaPredicted RBP12.05□□□□□ -0.48
VARS-216ENST00000428445 MFFQ9GZY8 342 aa12.05□□□□□ -0.48
VARS-216ENST00000428445 TRAV2A0A0B4J234 112 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 A0A1B0GU03 582 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 ATG12O94817 140 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 GIG44P09565 113 aaPredicted RBP12.04□□□□□ -0.48
VARS-216ENST00000428445 RBMY1A1P0DJD3 496 aaKnown RBP12.04□□□□□ -0.48
VARS-216ENST00000428445 RBMY1CP0DJD4 496 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 RND3P61587 244 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 LSM3P62310 102 aaKnown RBP12.04□□□□□ -0.48
VARS-216ENST00000428445 RBMY1FQ15415 496 aaKnown RBP12.04□□□□□ -0.48
VARS-216ENST00000428445 MLANAQ16655 118 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 DUSP18Q8NEJ0 188 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 PUS1Q9Y606 427 aaKnown RBP eCLIP12.04□□□□□ -0.48
VARS-216ENST00000428445 DNAH17Q9UFH2 4485 aa12.04□□□□□ -0.48
VARS-216ENST00000428445 EIF4EP06730 217 aaKnown RBP12.03□□□□□ -0.48
VARS-216ENST00000428445 SUB1P53999 127 aaKnown RBP eCLIP12.03□□□□□ -0.48
VARS-216ENST00000428445 Q8NAQ8 132 aa12.03□□□□□ -0.48
VARS-216ENST00000428445 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
VARS-216ENST00000428445 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
VARS-216ENST00000428445 COMMD3Q9UBI1 195 aa12.03□□□□□ -0.48
VARS-216ENST00000428445 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
VARS-216ENST00000428445 KNCNA6PVL3 124 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 CORTO00230 105 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 TNFAIP8O95379 198 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 SNCAP37840 140 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 TCTAP57738 103 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 CLEC5AQ9NY25 188 aa12.02□□□□□ -0.49
VARS-216ENST00000428445 IGHV4-28A0A0C4DH34 117 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 B3GALNT1O75752 331 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 TMEM50AO95807 157 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 PPP5CP53041 499 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 ZNF600Q6ZNG1 722 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 STHQ8IWL8 128 aa12.01□□□□□ -0.49
VARS-216ENST00000428445 C15orf40Q8WUR7 153 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms