RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 FAM223BA6NKX1 122 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 L7N2F9 121 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 CORTO00230 105 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 DEDDO75618 318 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 MPC2O95563 127 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 PRH1P02810 166 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 TRGV3P03979 118 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 NPY1RP25929 384 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 PAX9P55771 341 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 RPL23AP62750 156 aaKnown RBP12.02□□□□□ -0.49
COL11A1-204ENST00000427239 VAMP2P63027 116 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 LRRC37A5PQ49AS3 106 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 WDR89Q96FK6 387 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-204ENST00000427239 KLK15Q9H2R5 256 aa12.02□□□□□ -0.49
COL11A1-204ENST00000427239 RANGRFQ9HD47 186 aaPredicted RBP12.02□□□□□ -0.49
COL11A1-204ENST00000427239 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.49
COL11A1-204ENST00000427239 TSC22D2O75157 780 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 TMEM50AO95807 157 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 RAB11AP62491 216 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 RHOGP84095 191 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 CD83Q01151 205 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
COL11A1-204ENST00000427239 E5RGE8 158 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 C1QBP02746 253 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 AP2S1P53680 142 aaPredicted RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 MFAP2P55001 183 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 TPPP2P59282 170 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 IQCF2Q8IXL9 164 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 MYOZ3Q8TDC0 251 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 UBE2E2Q96LR5 201 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 FBXL7Q9UJT9 491 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 OR2J3O76001 311 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 RPLP1P05386 114 aaKnown RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 CD28P10747 220 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 ATP5G2Q06055 141 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 EXOSC2Q13868 293 aaKnown RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 KIAA0141Q14154 515 aaPredicted RBP12□□□□□ -0.49
COL11A1-204ENST00000427239 Q5BKY6 102 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 PRSS54Q6PEW0 395 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 THAP6Q8TBB0 222 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 CXorf58Q96LI9 332 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 C11orf1Q9H5F2 150 aa12□□□□□ -0.49
COL11A1-204ENST00000427239 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 IFNA4P05014 189 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 C15orf32Q32M92 178 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 C11orf87Q6NUJ2 197 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 C12orf54Q6X4T0 127 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 LCNL1Q6ZST4 164 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 OR2T35Q8NGX2 323 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 VN1R17PQ8TDU5 208 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 RNF126Q9BV68 326 aa11.99□□□□□ -0.49
COL11A1-204ENST00000427239 LYRM2Q9NU23 88 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-204ENST00000427239 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
COL11A1-204ENST00000427239 C15orf62A8K5M9 175 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 H0YIZ8 118 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 H3BP45 60 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 OR8U8P0C7N1 319 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 P2RY1P47900 373 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 CAV2P51636 162 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 C3orf56Q8N813 242 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 CITED1Q99966 193 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 ZNF747Q9BV97 191 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 OR5AC2Q9NZP5 309 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 PRELID1Q9Y255 219 aa11.98□□□□□ -0.49
COL11A1-204ENST00000427239 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
COL11A1-204ENST00000427239 NDUFB8O95169 186 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 LYL1P12980 280 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 ETFRF1Q6IPR1 90 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 TMEM14EPQ6UXP3 125 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 C11orf44Q8N8P7 122 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 OR4C12Q96R67 309 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 CITED2Q99967 270 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-204ENST00000427239 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 RPS10-NUDT3A0A1W2PQS6 291 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 I3L2K1 104 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 MT-CO2P00403 227 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 GPX4P36969 197 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-204ENST00000427239 SCARB1Q8WTV0 552 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 CACNG8Q8WXS5 425 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 PINX1Q96BK5 328 aaKnown RBP11.97□□□□□ -0.49
COL11A1-204ENST00000427239 CITED4Q96RK1 184 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 ATP6V0BQ99437 205 aa11.97□□□□□ -0.49
COL11A1-204ENST00000427239 SLC25A31Q9H0C2 315 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms