RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TFPI2P48307 235 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 PRCDQ00LT1 54 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 IZUMO4Q1ZYL8 232 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 LILRB2Q8N423 598 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
GACAT3-201ENST00000426539 ZNF114Q8NC26 417 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 TSC22D3Q99576 134 aa7.38□□□□□ -1.23
GACAT3-201ENST00000426539 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
GACAT3-201ENST00000426539 IGKV3-7A0A075B6H7 116 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 NUPL2O15504 423 aaKnown RBP7.37□□□□□ -1.23
GACAT3-201ENST00000426539 YIF1AO95070 293 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 APOHP02749 345 aaPredicted RBP7.37□□□□□ -1.23
GACAT3-201ENST00000426539 MFAP4P55083 255 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 UCP3P55916 312 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 RELQ04864 619 aaPredicted RBP7.37□□□□□ -1.23
GACAT3-201ENST00000426539 SPINK9Q5DT21 86 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 H2BFWTQ7Z2G1 175 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 GBGT1Q8N5D6 347 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 PHLDA1Q8WV24 401 aaPredicted RBP7.37□□□□□ -1.23
GACAT3-201ENST00000426539 MRGPRFQ96AM1 343 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 TXN2Q99757 166 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 CSTL1Q9H114 145 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 COMMD3Q9UBI1 195 aa7.37□□□□□ -1.23
GACAT3-201ENST00000426539 TRAV14DV4A0A0A6YYC5 116 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 P0C879 139 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 HSPE1P61604 102 aaKnown RBP7.36□□□□□ -1.23
GACAT3-201ENST00000426539 TSPAN5P62079 268 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 NCS1P62166 190 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 PVRIGQ6DKI7 326 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 LPCAT3Q6P1A2 487 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 TOMM20LQ6UXN7 152 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 SNX29P2Q8IUI4 249 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 OR4A16Q8NH70 328 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 ST8SIA2Q92186 375 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 PINX1Q96BK5 328 aaKnown RBP7.36□□□□□ -1.23
GACAT3-201ENST00000426539 VSIRQ9H7M9 311 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 SCPEP1Q9HB40 452 aa7.36□□□□□ -1.23
GACAT3-201ENST00000426539 KLK5Q9Y337 293 aaPredicted RBP7.36□□□□□ -1.23
GACAT3-201ENST00000426539 A0A0B4J293 547 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 A0A1B0GU03 582 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 MPTX1A8MV57 137 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 M0QYG6 137 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 GNG7O60262 68 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 DEDDO75618 318 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 APOA1P02647 267 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 ELK1P19419 428 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 PI3P19957 117 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 RCVRNP35243 200 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 NANOS2P60321 138 aaKnown RBP7.35□□□□□ -1.23
GACAT3-201ENST00000426539 TCF24Q7RTU0 167 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 FAM24BQ8N5W8 94 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 TMEM217Q8N7C4 229 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 GATAD1Q8WUU5 269 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 CMTM3Q96MX0 182 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 TP53RKQ96S44 253 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 RARRES2Q99969 163 aa7.35□□□□□ -1.23
GACAT3-201ENST00000426539 SSBP4Q9BWG4 385 aaPredicted RBP7.35□□□□□ -1.23
GACAT3-201ENST00000426539 MRPL36Q9P0J6 103 aaKnown RBP7.35□□□□□ -1.23
GACAT3-201ENST00000426539 A0A087WXM4 84 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 IGHV3-66A0A0C4DH42 116 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 A0A0G2JRQ6 117 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 INS-IGF2F8WCM5 200 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 HPGDSO60760 199 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 DFFBO76075 338 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 TMEM50AO95807 157 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 S100GP29377 79 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 RND3P61587 244 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 VBP1P61758 197 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 ERHP84090 104 aaKnown RBP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 MLANAQ16655 118 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 RNASE12Q5GAN4 147 aaKnown RBP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 LHFPL1Q86WI0 220 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 OR11H2Q8NH07 326 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 FUNDC2Q9BWH2 189 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 C6orf62Q9GZU0 229 aaPredicted RBP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 MS4A6AQ9H2W1 248 aa7.34□□□□□ -1.23
GACAT3-201ENST00000426539 C11orf68Q9H3H3 251 aaKnown RBP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 PUS1Q9Y606 427 aaKnown RBP eCLIP7.34□□□□□ -1.23
GACAT3-201ENST00000426539 KMT2AQ03164 3969 aa7.34□□□□□ -1.24
GACAT3-201ENST00000426539 SMIM31A0A1B0GVY4 71 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 DEFB4AO15263 64 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 ST8SIA3O43173 380 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 GIG44P09565 113 aaPredicted RBP7.33□□□□□ -1.24
GACAT3-201ENST00000426539 RNASE2P10153 161 aaKnown RBP7.33□□□□□ -1.24
GACAT3-201ENST00000426539 PIGPP57054 158 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 DEFB131AP59861 70 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 LEMD1Q68G75 181 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 LGALS9CQ6DKI2 356 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 ZNF600Q6ZNG1 722 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 DUSP18Q8NEJ0 188 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 FNDC4Q9H6D8 234 aaPredicted RBP7.33□□□□□ -1.24
GACAT3-201ENST00000426539 KLK11Q9UBX7 282 aa7.33□□□□□ -1.24
GACAT3-201ENST00000426539 TRAV2A0A0B4J234 112 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
GACAT3-201ENST00000426539 CD3DP04234 171 aa7.32□□□□□ -1.24
GACAT3-201ENST00000426539 PGAM2P15259 253 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms