RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ATMQ13315 3056 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 TACC2O95359 2948 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 SMPD2O60906 423 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 RPL24P83731 157 aaKnown RBP9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF645Q8N7E2 425 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 OR4A5Q8NH83 315 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 SLC25A40Q8TBP6 338 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 NPVFQ9HCQ7 196 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 CACNA1EQ15878 2313 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 PI4KAP42356 2102 aa9.3□□□□□ -0.92
SEC61A1-202ENST00000424880 TRGV10A0A0A0MS01 117 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF716A6NP11 495 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 K7EMI3 77 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 DUX1O43812 170 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 GDF1P27539 372 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 CXCL12P48061 93 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 Q6P435 159 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 NEGR1Q7Z3B1 354 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 NUP35Q8NFH5 326 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 FXYD7P58549 80 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 MEF2CQ06413 473 aaPredicted RBP9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 MORN5Q5VZ52 161 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 RNF138Q8WVD3 245 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 GALMQ96C23 342 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 THYN1Q9P016 225 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 PLXNB1O43157 2135 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 NCKAP5O14513 1909 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 HIGD1CA8MV81 97 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 HLA-DRB1P01911 266 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 HBZP02008 142 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 OPRK1P41145 380 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 UTF1Q5T230 341 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF497Q6ZNH5 498 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 WDR86Q86TI4 376 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 NINJ1Q92982 152 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 C1RLQ9NZP8 487 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 SIT1Q9Y3P8 196 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 NCOR1O75376 2440 aa9.29□□□□□ -0.92
SEC61A1-202ENST00000424880 IGLV3-32A0A0A0MS00 114 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 ANKRD30BLA7E2S9 258 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 LEPROTL1O95214 131 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 MT-CO3P00414 261 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 P04436 131 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 P0C879 139 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 EDDM3AQ14507 147 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 UBALD2Q8IYN6 164 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 OR4A16Q8NH70 328 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 ZNF391Q9UJN7 358 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 OR51B2Q9Y5P1 312 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 A0A1B0GV72 72 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 PLAUP00749 431 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 CEACAM3P40198 252 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 RPL39P5Q59GN2 51 aa9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
SEC61A1-202ENST00000424880 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 C9JCJ5 164 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 REG1BP48304 166 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 RAC3P60763 192 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 Q8TCH9 128 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 PERPQ96FX8 193 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 POM121L2Q96KW2 1035 aa9.27□□□□□ -0.92
SEC61A1-202ENST00000424880 TTC28Q96AY4 2481 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 PPIAL4CA0A0B4J2A2 164 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 MRPL33O75394 65 aaKnown RBP9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 HAND1O96004 215 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 DSCR4P56555 118 aaPredicted RBP9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 PCBD1P61457 104 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 CATR1Q13166 79 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 ACP7Q6ZNF0 438 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 ZNF503Q96F45 646 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 AP1S3Q96PC3 154 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 ASCL2Q99929 193 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 METRNQ9UJH8 293 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 KLF13Q9Y2Y9 288 aaPredicted RBP9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 RP1L1Q8IWN7 2480 aaPredicted RBP9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 H3BTX0 84 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 M0R296 226 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 SMIM17P0DL12 118 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 GPR183P32249 361 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 GNG3P63215 75 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 GNG5P63218 68 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 KRTAP27-1Q3LI81 207 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 TUSC5Q8IXB3 177 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 COMMD5Q9GZQ3 224 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 PCNX2A6NKB5 2137 aa9.27□□□□□ -0.93
SEC61A1-202ENST00000424880 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 IZUMO1RA6ND01 250 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 PRR33A8MZF0 331 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 GFRA3O60609 400 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 PYYP10082 97 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 C3AR1Q16581 482 aa9.26□□□□□ -0.93
SEC61A1-202ENST00000424880 FAM120AOSQ5T036 256 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms