RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 C15orf32Q32M92 178 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 Q5BKY6 102 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 NECAP1Q8NC96 275 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 RANGRFQ9HD47 186 aaPredicted RBP12.21□□□□□ -0.46
DDX55-203ENST00000421670 ZFP57Q9NU63 452 aa12.21□□□□□ -0.46
DDX55-203ENST00000421670 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 A0A1W2PRX2 142 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 MFSD2BA6NFX1 497 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 CYB5BO43169 146 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 IGHV3-11P01762 117 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 IGHV3-48P01763 117 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 HIST1H1BP16401 226 aaKnown RBP12.2□□□□□ -0.46
DDX55-203ENST00000421670 PVALBP20472 110 aaPredicted RBP12.2□□□□□ -0.46
DDX55-203ENST00000421670 CAV2P51636 162 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 KIAA0141Q14154 515 aaPredicted RBP12.2□□□□□ -0.46
DDX55-203ENST00000421670 KLK9Q2XQG4 91 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 C12orf54Q6X4T0 127 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 C18orf65Q6ZTR6 163 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 OR2T35Q8NGX2 323 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 OR5B12Q96R08 314 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 MBD2Q9UBB5 411 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 KLK9Q9UKQ9 250 aa12.2□□□□□ -0.46
DDX55-203ENST00000421670 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
DDX55-203ENST00000421670 FAM223BA6NKX1 122 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 TSC22D2O75157 780 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 CCNKO75909 580 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 IGHV3-23P01764 117 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 RLN2P04090 185 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 IFNA4P05014 189 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 PET100P0DJ07 73 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 TAS2R30P59541 319 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 RPL23AP62750 156 aaKnown RBP12.19□□□□□ -0.46
DDX55-203ENST00000421670 PVRIGQ6DKI7 326 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 FAM223AQ8IWN6 122 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 ZNF491Q8N8L2 437 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 CITED1Q99966 193 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 RNF126Q9BV68 326 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 GNB4Q9HAV0 340 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 THYN1Q9P016 225 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 TRRAPQ9Y4A5 3859 aa12.19□□□□□ -0.46
DDX55-203ENST00000421670 G3V3Q6 166 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 K7EIM0 57 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 LY86O95711 162 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 MT-CO2P00403 227 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 METTL15P1P0C7V9 234 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 OPRK1P41145 380 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 RPP30P78346 268 aaKnown RBP12.18□□□□□ -0.46
DDX55-203ENST00000421670 EXOSC2Q13868 293 aaKnown RBP12.18□□□□□ -0.46
DDX55-203ENST00000421670 PRSS54Q6PEW0 395 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 C3orf56Q8N813 242 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 FNDC4Q9H6D8 234 aaPredicted RBP12.18□□□□□ -0.46
DDX55-203ENST00000421670 LYRM2Q9NU23 88 aaPredicted RBP12.18□□□□□ -0.46
DDX55-203ENST00000421670 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 E5RGE8 158 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 I3L2K1 104 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 CORTO00230 105 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 RAB11AP62491 216 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 ATP5G2Q06055 141 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 NSUN5P1Q3KNT7 163 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 OR8G2PQ6IF36 304 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 ETV3LQ6ZN32 361 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 KLHL30-AS1Q8NEE0 82 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 ST6GAL2Q96JF0 529 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 UBE2E2Q96LR5 201 aa12.18□□□□□ -0.46
DDX55-203ENST00000421670 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
DDX55-203ENST00000421670 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 IGSF23A1L1A6 192 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 ADARB2-AS1A8MUL3 147 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 FGL1Q08830 312 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 MLANAQ16655 118 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 DEFB136Q30KP8 78 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 NOXA1Q86UR1 476 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 THAP6Q8TBB0 222 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 RNASEH2CQ8TDP1 164 aaKnown RBP12.17□□□□□ -0.46
DDX55-203ENST00000421670 SCARB1Q8WTV0 552 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 DCUN1D4Q92564 292 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 USMG5Q96IX5 58 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 CCDC140Q96MF4 163 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 ZNF747Q9BV97 191 aa12.17□□□□□ -0.46
DDX55-203ENST00000421670 NUDT19A8MXV4 375 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 CST7O76096 145 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 LYL1P12980 280 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 CDX1P47902 265 aaPredicted RBP12.16□□□□□ -0.46
DDX55-203ENST00000421670 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
DDX55-203ENST00000421670 C8orf86Q6ZUL3 223 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 AKAP14Q86UN6 197 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 UBAC2Q8NBM4 344 aa12.16□□□□□ -0.46
DDX55-203ENST00000421670 MRPL36Q9P0J6 103 aaKnown RBP12.16□□□□□ -0.46
DDX55-203ENST00000421670 ANKRD34BA5PLL1 514 aa12.15□□□□□ -0.46
DDX55-203ENST00000421670 PMS2P5A8MQ11 134 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms