RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 ZC4H2Q9NQZ6 224 aa13.59□□□□□ -0.23
MSL3-208ENST00000421368 F8W735 103 aaPredicted RBP13.58□□□□□ -0.24
MSL3-208ENST00000421368 I3L2K1 104 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 CSN3P07498 182 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 RNASE2P10153 161 aaKnown RBP13.58□□□□□ -0.24
MSL3-208ENST00000421368 SNCAP37840 140 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 GPHB5Q86YW7 130 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 LRTM2Q8N967 370 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 PRR25Q96S07 402 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 ENY2Q9NPA8 101 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 C21orf62Q9NYP8 219 aa13.58□□□□□ -0.24
MSL3-208ENST00000421368 DUXBA0A1W2PPF3 345 aa13.57□□□□□ -0.24
MSL3-208ENST00000421368 NXPH3O95157 252 aa13.57□□□□□ -0.24
MSL3-208ENST00000421368 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
MSL3-208ENST00000421368 SMCO1Q147U7 214 aa13.57□□□□□ -0.24
MSL3-208ENST00000421368 PVRIGQ6DKI7 326 aa13.57□□□□□ -0.24
MSL3-208ENST00000421368 ZNF256Q9Y2P7 627 aaPredicted RBP13.57□□□□□ -0.24
MSL3-208ENST00000421368 PIGBOS1A0A0B4J2F0 54 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 C9orf170A2RU37 121 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 OR2T8A6NH00 312 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 LGALS9O00182 355 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 TGOLN2O43493 480 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 MT-CO2P00403 227 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
MSL3-208ENST00000421368 BSXQ3C1V8 233 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 C11orf87Q6NUJ2 197 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 PLET1Q6UQ28 207 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 ADAMTSL5Q6ZMM2 481 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 ATP6V0BQ99437 205 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 WDR12Q9GZL7 423 aaKnown RBP13.56□□□□□ -0.24
MSL3-208ENST00000421368 PEMTQ9UBM1 199 aa13.56□□□□□ -0.24
MSL3-208ENST00000421368 IGHV3-35A0A0C4DH35 117 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 A0A1B0GU03 582 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 CEBPZOSA8MTT3 80 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 IGHV3-48P01763 117 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 OR4E1P0C645 316 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 SPNP16150 400 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 EDN2P20800 178 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 TNFRSF9Q07011 255 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 DHRS2Q13268 280 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 ZNF846Q147U1 533 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 UBAC2Q8NBM4 344 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 PINX1Q96BK5 328 aaKnown RBP13.55□□□□□ -0.24
MSL3-208ENST00000421368 BSCL2Q96G97 398 aaPredicted RBP13.55□□□□□ -0.24
MSL3-208ENST00000421368 CHRDL1Q9BU40 450 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 HEYLQ9NQ87 328 aaPredicted RBP13.55□□□□□ -0.24
MSL3-208ENST00000421368 SIGLEC8Q9NYZ4 499 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
MSL3-208ENST00000421368 DNAH9Q9NYC9 4486 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 LY86O95711 162 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 ADMP35318 185 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 SUB1P53999 127 aaKnown RBP eCLIP13.54□□□□□ -0.24
MSL3-208ENST00000421368 FAM106AQ4KMX7 169 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 Q56UQ5 140 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 SPSB3Q6PJ21 355 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 LYG2Q86SG7 212 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 ZNF436Q9C0F3 470 aaPredicted RBP13.54□□□□□ -0.24
MSL3-208ENST00000421368 C20orf85Q9H1P6 137 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 COL7A1Q02388 2944 aa13.54□□□□□ -0.24
MSL3-208ENST00000421368 C2orf70A6NJV1 201 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 A8MWP6 167 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 PITX3O75364 302 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 TCRBP04435 133 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 HOXB5P09067 269 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
MSL3-208ENST00000421368 HTR2BP41595 481 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 MFAP4P55083 255 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 UNQ9165/PRO28630Q6UXU0 137 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 RBKSQ9H477 322 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
MSL3-208ENST00000421368 ZNF320A2RRD8 509 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 TMEM213A2RRL7 107 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 CORTO00230 105 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 CTSGP08311 255 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 SLC25A6P12236 298 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 ASAH1Q13510 395 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 GGNBP1Q5YKI7 109 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 CACNG8Q8WXS5 425 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 ZNF414Q96IQ9 312 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 TXN2Q99757 166 aa13.52□□□□□ -0.25
MSL3-208ENST00000421368 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
MSL3-208ENST00000421368 TRAV6A0A075B6T7 132 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 ADAP1O75689 374 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 UPK1BO75841 260 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 FOLR2P14207 255 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 GP9P14770 177 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 IFITM3Q01628 133 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 DEFB121Q5J5C9 76 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 SLC24A4Q8NFF2 622 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 DTD1Q8TEA8 209 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 TMEM190Q8WZ59 177 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 HIPK2Q9H2X6 1198 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 NUDT15Q9NV35 164 aa13.51□□□□□ -0.25
MSL3-208ENST00000421368 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms