RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 C2orf88Q9BSF0 95 aa11.04□□□□□ -0.64
BDNF-208ENST00000418212 TUBA4BQ9H853 241 aa11.04□□□□□ -0.64
BDNF-208ENST00000418212 CGAP01215 116 aa11.04□□□□□ -0.64
BDNF-208ENST00000418212 BIVMQ86UB2 503 aa11.04□□□□□ -0.64
BDNF-208ENST00000418212 PIMREGQ9BSJ6 248 aa11.04□□□□□ -0.64
BDNF-208ENST00000418212 M0QZK8 103 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 GGCTO75223 188 aaKnown RBP11.03□□□□□ -0.64
BDNF-208ENST00000418212 IL6RP08887 468 aaPredicted RBP11.03□□□□□ -0.64
BDNF-208ENST00000418212 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 LINC00312Q9Y6C7 94 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 NPIPB11E5RHQ5 1161 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 FOXH1O75593 365 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 APCSP02743 223 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SOD3P08294 240 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 GCHFRP30047 84 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 C10orf55Q5SWW7 151 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 PLSCR4Q9NRQ2 329 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SMAD7O15105 426 aaKnown RBP11.03□□□□□ -0.64
BDNF-208ENST00000418212 PDLIM4P50479 330 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 TMEM177Q53S58 311 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 OR8A1Q8NGG7 326 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 CCL19Q99731 98 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 TMEM56-RWDD3S4R434 201 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 A6NNC1 897 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 ISLRO14498 428 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
BDNF-208ENST00000418212 CCKARP32238 428 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SPSB4Q96A44 273 aa11.03□□□□□ -0.64
BDNF-208ENST00000418212 SRRM5B3KS81 715 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 OTX1P32242 354 aaPredicted RBP11.02□□□□□ -0.64
BDNF-208ENST00000418212 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 TM4SF20Q53R12 229 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 ZNF738Q8NE65 137 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 METTL26Q96S19 204 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 TBX15Q96SF7 602 aa11.02□□□□□ -0.64
BDNF-208ENST00000418212 OR2T8A6NH00 312 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 TGFAP01135 160 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 AMY1AP04745 511 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 ELOBQ15370 118 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 ZNF525Q8N782 197 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 VKORC1Q9BQB6 163 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
BDNF-208ENST00000418212 IFI27L2Q9H2X8 130 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 C7orf69Q9H7B7 122 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
BDNF-208ENST00000418212 DENND4CQ5VZ89 1909 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 TBR1Q16650 682 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 KIR3DL3Q8N743 410 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 SRSF12Q8WXF0 261 aaKnown RBP11.02□□□□□ -0.65
BDNF-208ENST00000418212 NEU1Q99519 415 aa11.02□□□□□ -0.65
BDNF-208ENST00000418212 FASNP49327 2511 aaKnown RBP11.01□□□□□ -0.65
BDNF-208ENST00000418212 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 TM4SF5O14894 197 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 IGHV2-5P01817 119 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 CD5P06127 495 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 ATP5G3P48201 142 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 ICAM4Q14773 271 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 HERPUD1Q15011 391 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 PGLYRP4Q96LB8 373 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 NBEAP1P0C6P0 100 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 ID3Q02535 119 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 PRR30Q53SZ7 412 aaPredicted RBP11.01□□□□□ -0.65
BDNF-208ENST00000418212 HEPN1Q6WQI6 88 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 RBPMS2Q6ZRY4 209 aaKnown RBP11.01□□□□□ -0.65
BDNF-208ENST00000418212 RFNGQ9Y644 331 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 EYSQ5T1H1 3165 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 EREGO14944 169 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 TIMP3P35625 211 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 COX19Q49B96 90 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 ZNF474Q6S9Z5 364 aaPredicted RBP11.01□□□□□ -0.65
BDNF-208ENST00000418212 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 PLXNA4Q9HCM2 1894 aa11.01□□□□□ -0.65
BDNF-208ENST00000418212 YPEL1O60688 119 aa11□□□□□ -0.65
BDNF-208ENST00000418212 IGHV3-11P01762 117 aa11□□□□□ -0.65
BDNF-208ENST00000418212 DUTP33316 252 aaKnown RBP11□□□□□ -0.65
BDNF-208ENST00000418212 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
BDNF-208ENST00000418212 YPEL2Q96QA6 119 aa11□□□□□ -0.65
BDNF-208ENST00000418212 TXNDC17Q9BRA2 123 aa11□□□□□ -0.65
BDNF-208ENST00000418212 PROK2Q9HC23 129 aa11□□□□□ -0.65
BDNF-208ENST00000418212 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
BDNF-208ENST00000418212 PCDH15Q96QU1 1955 aa11□□□□□ -0.65
BDNF-208ENST00000418212 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
BDNF-208ENST00000418212 SLC17A3O00476 420 aa11□□□□□ -0.65
BDNF-208ENST00000418212 GPR183P32249 361 aa11□□□□□ -0.65
BDNF-208ENST00000418212 MEF2CQ06413 473 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms