RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 SMAD7O15105 426 aaKnown RBP16.49■□□□□ 0.23
CASC3-203ENST00000418132 MDKP21741 143 aaPredicted RBP16.49■□□□□ 0.23
CASC3-203ENST00000418132 SUB1P53999 127 aaKnown RBP eCLIP16.49■□□□□ 0.23
CASC3-203ENST00000418132 CX3CL1P78423 397 aa16.49■□□□□ 0.23
CASC3-203ENST00000418132 RUNX1Q01196 453 aa16.49■□□□□ 0.23
CASC3-203ENST00000418132 ZNF114Q8NC26 417 aa16.49■□□□□ 0.23
CASC3-203ENST00000418132 FAM213BQ8TBF2 198 aa16.49■□□□□ 0.23
CASC3-203ENST00000418132 SCGB1C1Q8TD33 95 aa16.49■□□□□ 0.23
CASC3-203ENST00000418132 RBM14Q96PK6 669 aaKnown RBP16.49■□□□□ 0.23
CASC3-203ENST00000418132 HLA-DRB1P01911 266 aa16.48■□□□□ 0.23
CASC3-203ENST00000418132 GUCA2BQ16661 112 aa16.48■□□□□ 0.23
CASC3-203ENST00000418132 C9orf139Q6ZV77 190 aa16.48■□□□□ 0.23
CASC3-203ENST00000418132 PVRIGQ6DKI7 326 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 SSMEM1Q8WWF3 244 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 TAF15Q92804 592 aaKnown RBP eCLIP16.47■□□□□ 0.23
CASC3-203ENST00000418132 RASL11BQ9BPW5 248 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 SEC11CQ9BY50 192 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 NKX6-2Q9C056 277 aaPredicted RBP16.47■□□□□ 0.23
CASC3-203ENST00000418132 CARHSP1Q9Y2V2 147 aaKnown RBP16.47■□□□□ 0.23
CASC3-203ENST00000418132 UMAD1C9J7I0 102 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 C9JQL5 133 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 REG1AP05451 166 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 SVBPQ8N300 66 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 SLC25A33Q9BSK2 321 aa16.47■□□□□ 0.23
CASC3-203ENST00000418132 IGHV7-81A0A0B4J1V7 117 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 FNDC10F2Z333 226 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 H3BUX3 64 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 NDPQ00604 133 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 BCL6BQ8N143 479 aaPredicted RBP16.46■□□□□ 0.23
CASC3-203ENST00000418132 COMMD1Q8N668 190 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 C5orf56Q8N8D9 126 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 RNASEH2CQ8TDP1 164 aaKnown RBP16.46■□□□□ 0.23
CASC3-203ENST00000418132 ARPC1AQ92747 370 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 WDR83OSQ9Y284 106 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 MOB4Q9Y3A3 225 aa16.46■□□□□ 0.23
CASC3-203ENST00000418132 NUPL2O15504 423 aaKnown RBP16.46■□□□□ 0.22
CASC3-203ENST00000418132 SFTA3P0C7M3 94 aa16.46■□□□□ 0.22
CASC3-203ENST00000418132 APELAP0DMC3 54 aa16.46■□□□□ 0.22
CASC3-203ENST00000418132 DEFB112Q30KQ8 113 aa16.46■□□□□ 0.22
CASC3-203ENST00000418132 ARSJQ5FYB0 599 aaPredicted RBP16.46■□□□□ 0.22
CASC3-203ENST00000418132 TMEM219Q86XT9 240 aa16.46■□□□□ 0.22
CASC3-203ENST00000418132 PSMG3Q9BT73 122 aaPredicted RBP16.46■□□□□ 0.22
CASC3-203ENST00000418132 RSG1Q9BU20 258 aa16.46■□□□□ 0.22
CASC3-203ENST00000418132 A6NDX4 124 aa16.45■□□□□ 0.22
CASC3-203ENST00000418132 OR1P1Q8NH06 330 aa16.45■□□□□ 0.22
CASC3-203ENST00000418132 FAM103A1Q9BTL3 118 aaKnown RBP16.45■□□□□ 0.22
CASC3-203ENST00000418132 SCRT1Q9BWW7 348 aa16.45■□□□□ 0.22
CASC3-203ENST00000418132 F11RQ9Y624 299 aaKnown RBP16.45■□□□□ 0.22
CASC3-203ENST00000418132 MDFIC2A0A1B0GVS7 189 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 CD69Q07108 199 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 TREML4Q6UXN2 200 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 CENPVQ7Z7K6 275 aaPredicted RBP16.44■□□□□ 0.22
CASC3-203ENST00000418132 ABHD5Q8WTS1 349 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 NPVFQ9HCQ7 196 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 ZNF469Q96JG9 3925 aaPredicted RBP16.44■□□□□ 0.22
CASC3-203ENST00000418132 A0A1B0GV50 99 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 DNASE2O00115 360 aaPredicted RBP16.44■□□□□ 0.22
CASC3-203ENST00000418132 CTRB1P17538 263 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 FGF7P21781 194 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 GPX4P36969 197 aaPredicted RBP16.44■□□□□ 0.22
CASC3-203ENST00000418132 MFAP2P55001 183 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 KRTAP1-1Q07627 177 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 GUK1Q16774 197 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 CTRB2Q6GPI1 263 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 CACNG8Q8WXS5 425 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 C22orf15Q8WYQ4 148 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 PITPNC1Q9UKF7 332 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 FBXO7Q9Y3I1 522 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 TIMM9Q9Y5J7 89 aa16.44■□□□□ 0.22
CASC3-203ENST00000418132 TSPAN4O14817 238 aa16.43■□□□□ 0.22
CASC3-203ENST00000418132 HSPB9Q9BQS6 159 aa16.43■□□□□ 0.22
CASC3-203ENST00000418132 MYO9AB2RTY4 2548 aa16.43■□□□□ 0.22
CASC3-203ENST00000418132 TLN2Q9Y4G6 2542 aa16.43■□□□□ 0.22
CASC3-203ENST00000418132 SMCO3A2RU48 225 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 MPDU1O75352 247 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 AMY1AP04745 511 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 EGR2P11161 476 aaPredicted RBP16.42■□□□□ 0.22
CASC3-203ENST00000418132 AKR1C8PQ5T2L2 129 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 ASPHD1Q5U4P2 390 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 NPCDR1Q9BY65 106 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 EIF5A2Q9GZV4 153 aaKnown RBP16.42■□□□□ 0.22
CASC3-203ENST00000418132 LSM4Q9Y4Z0 139 aaKnown RBP16.42■□□□□ 0.22
CASC3-203ENST00000418132 NOTCH2Q04721 2471 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 FAM74A7A6NL05 159 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 CRYGCP07315 174 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 SERF2P84101 59 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 PEA15Q15121 130 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 LY6EQ16553 131 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 FAM74A3Q4VXF1 159 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 C19orf35Q6ZS72 473 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 TEX29Q8N6K0 151 aa16.42■□□□□ 0.22
CASC3-203ENST00000418132 FNDC4Q9H6D8 234 aaPredicted RBP16.42■□□□□ 0.22
CASC3-203ENST00000418132 CORTO00230 105 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 CD5LO43866 347 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 GAMTQ14353 236 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 MLANAQ16655 118 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 SLC16A13Q7RTY0 426 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 DMRT1Q9Y5R6 373 aa16.41■□□□□ 0.22
CASC3-203ENST00000418132 NPIPB5A8MRT5 1133 aa16.4■□□□□ 0.22
CASC3-203ENST00000418132 H2AFB1P0C5Y9 115 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms