RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 WI2-2373I1.2A0A1W2PRP0 233 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 LGALS9O00182 355 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 LYRM1O43325 122 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 SFT2D2O95562 160 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 HLA-AP01891 365 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 SPSB3Q6PJ21 355 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 PLET1Q6UQ28 207 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 LRTM2Q8N967 370 aa13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 BSCL2Q96G97 398 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 GAR1Q9NY12 217 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-201ENST00000416295 A0A1B0GU03 582 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 K7EIL1 84 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 CORTO00230 105 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 PLA2G10O15496 165 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 TGOLN2O43493 480 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 WDR12Q9GZL7 423 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-201ENST00000416295 IGHV3-21A0A0B4J1V1 117 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 OR2T8A6NH00 312 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 CEBPZOSA8MTT3 80 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 I3L2K1 104 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 LY86O95711 162 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 CSN3P07498 182 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 ANKRD55Q3KP44 614 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 Q56UQ5 140 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 UBAC2Q8NBM4 344 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 PINX1Q96BK5 328 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 TXN2Q99757 166 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 HEYLQ9NQ87 328 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 ZC4H2Q9NQZ6 224 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 FLVCR2Q9UPI3 526 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 TMED3Q9Y3Q3 217 aa13.72□□□□□ -0.21
SEMA3B-201ENST00000416295 MT-CO2P00403 227 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 SLC25A6P12236 298 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 FCGR2BP31994 310 aaPredicted RBP13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 HTR2BP41595 481 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 MFAP4P55083 255 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 TNFRSF9Q07011 255 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 ZNF846Q147U1 533 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 PVRIGQ6DKI7 326 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 PRR25Q96S07 402 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 HIPK2Q9H2X6 1198 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 HSPB7Q9UBY9 170 aa13.71□□□□□ -0.21
SEMA3B-201ENST00000416295 ZNF320A2RRD8 509 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 C9orf170A2RU37 121 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 A8MWP6 167 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 F8W735 103 aaPredicted RBP13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 OR4E1P0C645 316 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 SPNP16150 400 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 DHRS2Q13268 280 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 C4orf46Q504U0 113 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 LYG2Q86SG7 212 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 OR1S1Q8NH92 325 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 COQ8AQ8NI60 647 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 C20orf85Q9H1P6 137 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 PALMDQ9NP74 551 aa13.7□□□□□ -0.22
SEMA3B-201ENST00000416295 C2orf70A6NJV1 201 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 NUPL2O15504 423 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 NXPH3O95157 252 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 ANXA7P20073 488 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 DEFB121Q5J5C9 76 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 LCN12Q6JVE5 192 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 NOXA1Q86UR1 476 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 SLC24A4Q8NFF2 622 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 OR2K2Q8NGT1 345 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 DYNLRB2Q8TF09 96 aa13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 ZNF436Q9C0F3 470 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-201ENST00000416295 FOLR2P14207 255 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 GP9P14770 177 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 ELLP55199 621 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 RELQ04864 619 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 C2orf83Q53S99 150 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 MZT2BQ6NZ67 158 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 DUSP18Q8NEJ0 188 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 CHRDL1Q9BU40 450 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 UFC1Q9Y3C8 167 aa13.68□□□□□ -0.22
SEMA3B-201ENST00000416295 IGHV3-35A0A0C4DH35 117 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 TMEM213A2RRL7 107 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 FAM90A26D6RGX4 464 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 NDUFA4O00483 81 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 GNG7O60262 68 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 PITX3O75364 302 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 UPK1BO75841 260 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 TCRBP04435 133 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 CTSGP08311 255 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 HOXB5P09067 269 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 ADMP35318 185 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 OPRK1P41145 380 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 NPBWR1P48145 328 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 DTD1Q8TEA8 209 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 TMEM190Q8WZ59 177 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 MARC2Q969Z3 335 aa13.67□□□□□ -0.22
SEMA3B-201ENST00000416295 RBKSQ9H477 322 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms