RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TAGLN2P37802 199 aaKnown RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 REG1BP48304 166 aa13.71□□□□□ -0.21
PTPRC-206ENST00000413409 RPS16P62249 146 aaKnown RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 RPL8P62917 257 aaKnown RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 ACOT6Q3I5F7 207 aaPredicted RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
PTPRC-206ENST00000413409 OR1L8Q8NGR8 309 aa13.71□□□□□ -0.21
PTPRC-206ENST00000413409 ACTR3CQ9C0K3 210 aaPredicted RBP13.71□□□□□ -0.21
PTPRC-206ENST00000413409 TEX50A0A1B0GTY4 177 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 A0A1W2PN81 502 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 SEC14L6B5MCN3 397 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 M0R1W7 72 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 CA2P00918 260 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 IGKV1D-33P01593 117 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 IGKV1-33P01594 117 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 IGLV2-23P01705 113 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 CHRNA7P36544 502 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 OPRK1P41145 380 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 LGALS7P47929 136 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 C2orf83Q53S99 150 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 SSX7Q7RTT5 188 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 RPP25LQ8N5L8 163 aaKnown RBP13.7□□□□□ -0.22
PTPRC-206ENST00000413409 RARRES2Q99969 163 aa13.7□□□□□ -0.22
PTPRC-206ENST00000413409 LSM4Q9Y4Z0 139 aaKnown RBP13.7□□□□□ -0.22
PTPRC-206ENST00000413409 C22orf46C9J442 243 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 DIAPH2-AS1Q14236 149 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 HAGHQ16775 308 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 LCN15Q6UWW0 184 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 OR10G9Q8NGN4 311 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 OR10G7Q8NGN6 311 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 P2RX4Q99571 388 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 COMMD5Q9GZQ3 224 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 NDUFA4L2Q9NRX3 87 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 SLC39A9Q9NUM3 307 aa13.69□□□□□ -0.22
PTPRC-206ENST00000413409 SMCO3A2RU48 225 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 BUB1B-PAK6H3BSN5 160 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 MSMBP08118 114 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 MYOD1P15172 320 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 RHEBQ15382 184 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 KIR3DL3Q8N743 410 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 SSBP3Q9BWW4 388 aaPredicted RBP13.68□□□□□ -0.22
PTPRC-206ENST00000413409 GGTLC1Q9BX51 225 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 HINT2Q9BX68 163 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 NPVFQ9HCQ7 196 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 GNG13Q9P2W3 67 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 DOCK11Q5JSL3 2073 aa13.68□□□□□ -0.22
PTPRC-206ENST00000413409 TSPAN4O14817 238 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 CYB5BO43169 146 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 OR13C7P0DN81 318 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 PAX6P26367 422 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 GPR6P46095 362 aaPredicted RBP13.67□□□□□ -0.22
PTPRC-206ENST00000413409 FBLN7Q53RD9 439 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 OR4P4Q8NGL7 312 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 RXFP4Q8TDU9 374 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 MGST2Q99735 147 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 SLC25A22Q9H936 323 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 MANBALQ9NQG1 85 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 ONECUT1Q9UBC0 465 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 VAX2Q9UIW0 290 aa13.67□□□□□ -0.22
PTPRC-206ENST00000413409 RNASE2P10153 161 aaKnown RBP13.66□□□□□ -0.22
PTPRC-206ENST00000413409 CDC34P49427 236 aaPredicted RBP13.66□□□□□ -0.22
PTPRC-206ENST00000413409 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
PTPRC-206ENST00000413409 FAM122CQ6P4D5 195 aa13.66□□□□□ -0.22
PTPRC-206ENST00000413409 TEPPQ6URK8 271 aa13.66□□□□□ -0.22
PTPRC-206ENST00000413409 RBMS3Q6XE24 437 aaKnown RBP13.66□□□□□ -0.22
PTPRC-206ENST00000413409 MRPL41Q8IXM3 137 aaKnown RBP13.66□□□□□ -0.22
PTPRC-206ENST00000413409 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
PTPRC-206ENST00000413409 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 LY6LH3BQJ8 138 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 NUPL2O15504 423 aaKnown RBP13.65□□□□□ -0.22
PTPRC-206ENST00000413409 COX7A1P24310 79 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 MAS1LP35410 378 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 FGF8P55075 233 aaPredicted RBP13.65□□□□□ -0.22
PTPRC-206ENST00000413409 ERHP84090 104 aaKnown RBP13.65□□□□□ -0.22
PTPRC-206ENST00000413409 RAB31Q13636 194 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 CBLN2Q8IUK8 224 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 CYB561D1Q8N8Q1 229 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 RPEQ96AT9 228 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 RNF5Q99942 180 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 ZNF430Q9H8G1 570 aaPredicted RBP13.65□□□□□ -0.22
PTPRC-206ENST00000413409 SMCO4Q9NRQ5 59 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 PXMP4Q9Y6I8 212 aa13.65□□□□□ -0.22
PTPRC-206ENST00000413409 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 C1orf122Q6ZSJ8 110 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 MMD2Q8IY49 270 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 C22orf15Q8WYQ4 148 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 RAB24Q969Q5 203 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 INSIG2Q9Y5U4 225 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 WNK2Q9Y3S1 2297 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 ODF3BA8MYP8 253 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 SLC25A17O43808 307 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 YIF1AO95070 293 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 CRYGBP07316 175 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 PRTN3P24158 256 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
PTPRC-206ENST00000413409 RPL29P47914 159 aaKnown RBP13.64□□□□□ -0.23
PTPRC-206ENST00000413409 LMO4P61968 165 aa13.64□□□□□ -0.23
PTPRC-206ENST00000413409 TPTE2P1Q5T6R2 138 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms