RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
MCF2L-211ENST00000413354 MFAP4P55083 255 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 AP3S2P59780 193 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 RELQ04864 619 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-211ENST00000413354 IZUMO4Q1ZYL8 232 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 SLC16A13Q7RTY0 426 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 RBPMSQ93062 196 aaKnown RBP11.84□□□□□ -0.51
MCF2L-211ENST00000413354 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 RTBDNQ9BSG5 229 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-211ENST00000413354 MCUBQ9NWR8 336 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 MLXQ9UH92 298 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
MCF2L-211ENST00000413354 A0A0B4J293 547 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 CRYM-AS1A6NIL9 109 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 I3L2K1 104 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 ZNF701M0R085 212 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-211ENST00000413354 CORTO00230 105 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 CDS2O95674 445 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 BTNL8Q6UX41 500 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 TMEM61Q8N0U2 210 aa11.83□□□□□ -0.52
MCF2L-211ENST00000413354 WDR89Q96FK6 387 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-211ENST00000413354 F8W735 103 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-211ENST00000413354 MT-CO2P00403 227 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 PYDC2Q56P42 97 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 SPINK9Q5DT21 86 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
MCF2L-211ENST00000413354 GLYATL2Q8WU03 294 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 PINX1Q96BK5 328 aaKnown RBP11.82□□□□□ -0.52
MCF2L-211ENST00000413354 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 CHRDL1Q9BU40 450 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 CACFD1Q9UGQ2 172 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
MCF2L-211ENST00000413354 HUWE1Q7Z6Z7 4374 aaKnown RBP11.81□□□□□ -0.52
MCF2L-211ENST00000413354 PIGBOS1A0A0B4J2F0 54 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 GNG7O60262 68 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 CD7P09564 240 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 ADMP35318 185 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 NPBWR1P48145 328 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 SPCS3P61009 180 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 TMEM268Q5VZI3 342 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 OR52B4Q8NGK2 314 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 GALNT14Q96FL9 552 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 C20orf24Q9BUV8 137 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 RBM38Q9H0Z9 239 aaKnown RBP11.81□□□□□ -0.52
MCF2L-211ENST00000413354 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
MCF2L-211ENST00000413354 TENM3Q9P273 2699 aa11.81□□□□□ -0.52
MCF2L-211ENST00000413354 A0A0G2JRQ6 117 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 C15orf62A8K5M9 175 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 OR11H12B2RN74 326 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 K7EMT4 169 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 SCAF4O95104 1147 aaKnown RBP11.8□□□□□ -0.52
MCF2L-211ENST00000413354 CTSGP08311 255 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 ANXA3P12429 323 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 SRPXP78539 464 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 HAGHQ16775 308 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 SELENOHQ8IZQ5 122 aaKnown RBP11.8□□□□□ -0.52
MCF2L-211ENST00000413354 TOMM5Q8N4H5 51 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 DUSP18Q8NEJ0 188 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 TRIM63Q969Q1 353 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 SRD5A3Q9H8P0 318 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 CACNG5Q9UF02 275 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
MCF2L-211ENST00000413354 SCGB2A1O75556 95 aa11.79□□□□□ -0.52
MCF2L-211ENST00000413354 ETV6P41212 452 aa11.79□□□□□ -0.52
MCF2L-211ENST00000413354 KLF9Q13886 244 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-211ENST00000413354 SPAG8Q99932 426 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-211ENST00000413354 V9GYH0 126 aa11.79□□□□□ -0.52
MCF2L-211ENST00000413354 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 YIF1AO95070 293 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 RNASE2P10153 161 aaKnown RBP11.78□□□□□ -0.52
MCF2L-211ENST00000413354 BMI1P35226 326 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 TMEM187Q14656 261 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 PVRIGQ6DKI7 326 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 DEFB125Q8N687 156 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 TMEM230Q96A57 120 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
MCF2L-211ENST00000413354 TSPAN4O14817 238 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 AKR1C4P17516 323 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 OPRK1P41145 380 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 HTR2BP41595 481 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 ZNF79Q15937 498 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 Q6ZRM9 215 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 CCDC190Q86UF4 302 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 GPR146Q96CH1 333 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 OR10C1Q96KK4 312 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 CITED4Q96RK1 184 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 WFDC10AQ9H1F0 79 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
MCF2L-211ENST00000413354 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms