RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 APELAP0DMC3 54 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 PSMB8P28062 276 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 GPX4P36969 197 aaPredicted RBP14.6□□□□□ -0.07
CDC42-204ENST00000411827 HBG1P69891 147 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 HBG2P69892 147 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 SLC25A24Q6NUK1 477 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 INO80EQ8NBZ0 244 aaPredicted RBP14.6□□□□□ -0.07
CDC42-204ENST00000411827 PINX1Q96BK5 328 aaKnown RBP14.6□□□□□ -0.07
CDC42-204ENST00000411827 GGACTQ9BVM4 153 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 LINC00527Q9UJ94 153 aa14.6□□□□□ -0.07
CDC42-204ENST00000411827 C15orf62A8K5M9 175 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 HMSDA8MTL9 139 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 PFDN1O60925 122 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 REG1AP05451 166 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 PROK1P58294 105 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 ZNF546Q86UE3 836 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 OR5AU1Q8NGC0 362 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 OR10P1Q8NGE3 313 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 VN1R17PQ8TDU5 208 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 WIPF2Q8TF74 440 aaPredicted RBP14.59□□□□□ -0.07
CDC42-204ENST00000411827 DCUN1D4Q92564 292 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 FANCD2OSQ96PS1 177 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 NEURL2Q9BR09 285 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 GAR1Q9NY12 217 aaKnown RBP14.59□□□□□ -0.07
CDC42-204ENST00000411827 OR5AC2Q9NZP5 309 aa14.59□□□□□ -0.07
CDC42-204ENST00000411827 TRAV14DV4A0A0A6YYC5 116 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 FNDC10F2Z333 226 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 SOX15O60248 233 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 C1QBP02746 253 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 TRGV3P03979 118 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 PF4V1P10720 104 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 S100A11P31949 105 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 SULT1A1P50225 295 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 RAB9AP51151 201 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 ETV3LQ6ZN32 361 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 PRIMA1Q86XR5 153 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 TMEM252Q8N6L7 170 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.58□□□□□ -0.08
CDC42-204ENST00000411827 HYLS1Q96M11 299 aa14.58□□□□□ -0.08
CDC42-204ENST00000411827 FBN1P35555 2871 aaKnown RBP14.58□□□□□ -0.08
CDC42-204ENST00000411827 SCGB2A1O75556 95 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 RHOGP84095 191 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 ATP6V1FQ16864 119 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 ZNF329Q86UD4 541 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 AQP10Q96PS8 301 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 OR4C12Q96R67 309 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 TXN2Q99757 166 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 FBXL7Q9UJT9 491 aa14.57□□□□□ -0.08
CDC42-204ENST00000411827 PAIP2BQ9ULR5 123 aaKnown RBP14.57□□□□□ -0.08
CDC42-204ENST00000411827 FXYD6-FXYD2A0A087WZ82 144 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 TRBV7-1A0A0A6YYK4 115 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 H3BP45 60 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 MDKP21741 143 aaPredicted RBP14.56□□□□□ -0.08
CDC42-204ENST00000411827 RPL12P30050 165 aaKnown RBP14.56□□□□□ -0.08
CDC42-204ENST00000411827 TPPP2P59282 170 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 ATP5G2Q06055 141 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 MYOZ3Q8TDC0 251 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 MISP3Q96FF7 219 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 UBE2E2Q96LR5 201 aa14.56□□□□□ -0.08
CDC42-204ENST00000411827 G3V3Q6 166 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 FCGR2BP31994 310 aaPredicted RBP14.55□□□□□ -0.08
CDC42-204ENST00000411827 OPRK1P41145 380 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 MFAP2P55001 183 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 DLK1P80370 383 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 CD69Q07108 199 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 Q5BKY6 102 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 ACOT7LQ6ZUV0 252 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 TMEM170AQ8WVE7 144 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 EEF1AKMT3Q96AZ1 226 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 PPP1R14BQ96C90 147 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 ZC4H2Q9NQZ6 224 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 TNFSF18Q9UNG2 199 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 ATRQ13535 2644 aa14.55□□□□□ -0.08
CDC42-204ENST00000411827 FAM24AA6NFZ4 105 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 I3L2K1 104 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 METTL15P1P0C7V9 234 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 CDX1P47902 265 aaPredicted RBP14.54□□□□□ -0.08
CDC42-204ENST00000411827 NPBWR1P48145 328 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 EWSR1Q01844 656 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDC42-204ENST00000411827 OR2F1Q13607 317 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 ZNF345Q14585 488 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 C15orf32Q32M92 178 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 KRTAP24-1Q3LI83 254 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 ZFP69Q49AA0 526 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 MS4A10Q96PG2 267 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 DMRT1Q9Y5R6 373 aa14.54□□□□□ -0.08
CDC42-204ENST00000411827 A0A0D9SG52 128 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 OR2J3O76001 311 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 MT-CO2P00403 227 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 MFAP4P55083 255 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 AWAT1Q58HT5 328 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 OR1S2Q8NGQ3 325 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 SLC35E1Q96K37 410 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 C19orf24Q9BVV8 132 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 HSPB11Q9Y547 144 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 COL6A5A8TX70 2615 aa14.53□□□□□ -0.08
CDC42-204ENST00000411827 TRAV30A0A087WSZ9 112 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 IGSF23A1L1A6 192 aa14.52□□□□□ -0.09
CDC42-204ENST00000411827 PMS2P5A8MQ11 134 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms