RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 LHFPL1Q86WI0 220 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 SLC35G3Q8N808 338 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 PDCD10Q9BUL8 212 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 KLK11Q9UBX7 282 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 HYDINQ4G0P3 5121 aa10.94□□□□□ -0.66
CBX3-203ENST00000409747 TRAV14DV4A0A0A6YYC5 116 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 CORTO00230 105 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 CHEK1O14757 476 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 GABARAPO95166 117 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 NPBWR1P48145 328 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 RNASE12Q5GAN4 147 aaKnown RBP10.93□□□□□ -0.66
CBX3-203ENST00000409747 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 CCDC71LQ8N9Z2 235 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 RNF2Q99496 336 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 EXTL2Q9UBQ6 330 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
CBX3-203ENST00000409747 ALMS1Q8TCU4 4167 aa10.93□□□□□ -0.66
CBX3-203ENST00000409747 A0A0J9YWU9 116 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 CXorf65A6NEN9 183 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 NUPR2A6NF83 97 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 INS-IGF2F8WCM5 200 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 B3GALNT1O75752 331 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 CD3DP04234 171 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 ATF4P18848 351 aaPredicted RBP10.92□□□□□ -0.66
CBX3-203ENST00000409747 SUB1P53999 127 aaKnown RBP eCLIP10.92□□□□□ -0.666e-13■■■■■ 133.3
CBX3-203ENST00000409747 PAFAH1B2P68402 229 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 LYG2Q86SG7 212 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 DUSP18Q8NEJ0 188 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 OR52I2Q8NH67 350 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 ZFAND1Q8TCF1 268 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 RNF183Q96D59 192 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 COPZ2Q9P299 210 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 IFNA17P01571 189 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 PI3P19957 117 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 TAS2R19P59542 299 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 CTF1Q16619 201 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 TP53RKQ96S44 253 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
CBX3-203ENST00000409747 SCGB2A1O75556 95 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 IGKV1-5P01602 117 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 IGHV3-48P01763 117 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 RPL35AP18077 110 aaKnown RBP10.91□□□□□ -0.66
CBX3-203ENST00000409747 PPP5CP53041 499 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 RRNAD1Q96FB5 475 aaKnown RBP10.91□□□□□ -0.66
CBX3-203ENST00000409747 ZNF414Q96IQ9 312 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 ENY2Q9NPA8 101 aa10.91□□□□□ -0.66
CBX3-203ENST00000409747 BIRC6Q9NR09 4857 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 P0C879 139 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 HOXA1P49639 335 aaPredicted RBP10.9□□□□□ -0.66
CBX3-203ENST00000409747 SSBP1Q04837 148 aaKnown RBP10.9□□□□□ -0.66
CBX3-203ENST00000409747 PMS2P11Q13670 270 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 IZUMO4Q1ZYL8 232 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 TMEM229BQ8NBD8 167 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 TERB2Q8NHR7 220 aa10.9□□□□□ -0.66
CBX3-203ENST00000409747 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
CBX3-203ENST00000409747 IGHV3-49A0A0A0MS15 119 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 A0A0B4J293 547 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 RAB3DO95716 219 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 CD74P04233 296 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 TFPI2P48307 235 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
CBX3-203ENST00000409747 SCGB2B2Q4G0G5 96 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 GPR107Q5VW38 600 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 APRG1Q8IVJ8 170 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 ABHD1Q96SE0 405 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 NAA50Q9GZZ1 169 aaKnown RBP10.89□□□□□ -0.67
CBX3-203ENST00000409747 TMEM231Q9H6L2 316 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 IGKV3-7A0A075B6H7 116 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 GABARAPH6UMI1 98 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 UCP1P25874 307 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 MEF2DQ14814 521 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 PVRIGQ6DKI7 326 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 STEAP1BQ6NZ63 245 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 TCF24Q7RTU0 167 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 FAM219AQ8IW50 185 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 OR13C8Q8NGS7 320 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 LINC00476Q8WZB0 136 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
CBX3-203ENST00000409747 TRAV2A0A0B4J234 112 aa10.88□□□□□ -0.67
CBX3-203ENST00000409747 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
CBX3-203ENST00000409747 RGS5O15539 181 aa10.88□□□□□ -0.67
CBX3-203ENST00000409747 SMIM18P0DKX4 95 aa10.88□□□□□ -0.67
CBX3-203ENST00000409747 OR4D10Q8NGI6 311 aa10.88□□□□□ -0.67
CBX3-203ENST00000409747 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
CBX3-203ENST00000409747 KLK5Q9Y337 293 aaPredicted RBP10.88□□□□□ -0.67
CBX3-203ENST00000409747 PUS1Q9Y606 427 aaKnown RBP eCLIP10.88□□□□□ -0.67
CBX3-203ENST00000409747 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
CBX3-203ENST00000409747 DNASE2O00115 360 aaPredicted RBP10.87□□□□□ -0.67
CBX3-203ENST00000409747 DFFBO76075 338 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms