RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MGAM2Q2M2H8 2515 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 IGLV11-55A0A075B6I3 123 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 TRBV9A0A0B4J1U6 114 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 FAM223BA6NKX1 122 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 TRGV3P03979 118 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 RAB9AP51151 201 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 CAV2P51636 162 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 PAX9P55771 341 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 EXOSC2Q13868 293 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 C11orf87Q6NUJ2 197 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 FAM223AQ8IWN6 122 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 FANCD2OSQ96PS1 177 aa12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 PAIP2BQ9ULR5 123 aaKnown RBP12.88□□□□□ -0.35
TSPAN4-208ENST00000409531 C15orf62A8K5M9 175 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 H3BP45 60 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 TMEM50AO95807 157 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 PRH1P02810 166 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 IFNA4P05014 189 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 P2RY1P47900 373 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 TPPP2P59282 170 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 C10orf99Q6UWK7 81 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 C19orf35Q6ZS72 473 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 MISP3Q96FF7 219 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 MS4A10Q96PG2 267 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 OR5AC2Q9NZP5 309 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 MBD2Q9UBB5 411 aa12.87□□□□□ -0.35
TSPAN4-208ENST00000409531 PKD1L1Q8TDX9 2849 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 TRAV14DV4A0A0A6YYC5 116 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 H0YIZ8 118 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 LYL1P12980 280 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 RHOGP84095 191 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 DCUN1D4Q92564 292 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 SLC25A31Q9H0C2 315 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 FBXL7Q9UJT9 491 aa12.86□□□□□ -0.35
TSPAN4-208ENST00000409531 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 RPS10-NUDT3A0A1W2PQS6 291 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 OR2J3O76001 311 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 SLC25A4P12235 298 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 MFAP2P55001 183 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 TMEM14EPQ6UXP3 125 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 ETV3LQ6ZN32 361 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 STX12Q86Y82 276 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 TCTE3Q8IZS6 198 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 PINX1Q96BK5 328 aaKnown RBP12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 CXorf58Q96LI9 332 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 DMRT1Q9Y5R6 373 aa12.85□□□□□ -0.35
TSPAN4-208ENST00000409531 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 CD28P10747 220 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 OPRK1P41145 380 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 C15orf32Q32M92 178 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 FAM209BQ5JX69 171 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 OR10P1Q8NGE3 313 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 MYOZ3Q8TDC0 251 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
TSPAN4-208ENST00000409531 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 FAM24AA6NFZ4 105 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 METTL15P1P0C7V9 234 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 SULT1A1P50225 295 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 HBG1P69891 147 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 HBG2P69892 147 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 BAXQ07812 192 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 Q5BKY6 102 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 ZNF491Q8N8L2 437 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 UBE2E2Q96LR5 201 aa12.83□□□□□ -0.36
TSPAN4-208ENST00000409531 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 TRBV7-1A0A0A6YYK4 115 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 I3L2K1 104 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 NDUFB8O95169 186 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 MT-CO2P00403 227 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 CDX1P47902 265 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 CD69Q07108 199 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 HIST2H2BDQ6DRA6 164 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 OR8G2PQ6IF36 304 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
TSPAN4-208ENST00000409531 ZNF546Q86UE3 836 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms