RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PTTG1IPP53801 180 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 LHFPL1Q86WI0 220 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 MYOZ3Q8TDC0 251 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 GPX1P07203 203 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 DDTP30046 118 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 OR4B1Q8NGF8 309 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 SLC50A1Q9BRV3 221 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 IGKV1D-13A0A0B4J2D9 117 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 PLAUP00749 431 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 IGKV1-13P0DP09 117 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 TMEM97Q5BJF2 176 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 Q8TCH9 128 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 GSX1Q9H4S2 264 aaPredicted RBP13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 HELZP42694 1942 aaKnown RBP13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 J3KRW8 73 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 CEACAM4O75871 244 aa13.92□□□□□ -0.18
PCDHA13-202ENST00000409494 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 CX3CL1P78423 397 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 DIRC3C9JPN6 131 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 TIMM23O14925 209 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 CSN3P07498 182 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 RELBQ01201 579 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 EFNB3Q15768 340 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 MAP1LC3CQ9BXW4 147 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 FHL1Q13642 323 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 LBHQ53QV2 105 aaPredicted RBP13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 HSPB9Q9BQS6 159 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 TMEM200BQ69YZ2 307 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
PCDHA13-202ENST00000409494 IGKV1D-8A0A087WSZ0 117 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 A0A087WWC5 75 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 HGFACQ04756 655 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 CRIM1Q9NZV1 1036 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 FOXA2Q9Y261 457 aaPredicted RBP13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 IGKV1-27A0A075B6S5 117 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 PPP1R17O96001 155 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 RPLP1P05386 114 aaKnown RBP13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 ZNF25P17030 456 aaPredicted RBP13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 ANOS1P23352 680 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 SLC25A48Q6ZT89 311 aaKnown RBP13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 C11orf42Q8N5U0 333 aa13.9□□□□□ -0.18
PCDHA13-202ENST00000409494 J3QKU1 62 aa13.9□□□□□ -0.19
PCDHA13-202ENST00000409494 LINC01356Q8N9X3 169 aa13.9□□□□□ -0.19
PCDHA13-202ENST00000409494 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.19
PCDHA13-202ENST00000409494 HEATR1Q9H583 2144 aaKnown RBP13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 TRBV9A0A0B4J1U6 114 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 TRAV40A0A0B4J280 105 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 E7EQL1 145 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 CD69Q07108 199 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 SP5Q6BEB4 398 aaPredicted RBP13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 CD99P14209 185 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 PRTN3P24158 256 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 GPR183P32249 361 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 FAM159AQ6UWV7 190 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 CD177Q8N6Q3 437 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 ZNF525Q8N782 197 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 TNFSF13O75888 250 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 GAFA1Q96PS6 74 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 Q6P435 159 aa13.89□□□□□ -0.19
PCDHA13-202ENST00000409494 TMSB15BA0A087X1C1 80 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 A6NNC1 897 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 PSPNO60542 156 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 TAS2R60P59551 318 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 VMO1Q7Z5L0 202 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 TMEM167AQ8TBQ9 72 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 J3QR89 54 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 TWIST1Q15672 202 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 AKAP6Q13023 2319 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 DUSP14O95147 198 aaKnown RBP13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 CRYBB3P26998 211 aa13.88□□□□□ -0.19
PCDHA13-202ENST00000409494 PAX1P15863 534 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 CFHR2P36980 270 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 LYRM7Q5U5X0 104 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 Q6AWC8 147 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 MRPL18Q9H0U6 180 aaKnown RBP13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 CACNA1GO43497 2377 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 TCF24Q7RTU0 167 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 TMEM183AQ8IXX5 376 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 EAF1Q96JC9 268 aaPredicted RBP13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 MLNRO43193 412 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 IGLV1-44P01699 117 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 IGFBP2P18065 325 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 RNF138Q8WVD3 245 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 C1QTNF9BB2RNN3 333 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 C1QTNF9P0C862 333 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 PRSS8Q16651 343 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 SPSB3Q6PJ21 355 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 GSN-AS1Q9NRJ2 163 aa13.87□□□□□ -0.19
PCDHA13-202ENST00000409494 CD55P08174 381 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 LMO1P25800 156 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 CBY3A6NI87 242 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 H7C1H1 209 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 C2orf83Q53S99 150 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 CLEC19AQ6UXS0 136 aa13.86□□□□□ -0.19
PCDHA13-202ENST00000409494 GOLT1AQ6ZVE7 132 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms