RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 S100ZQ8WXG8 99 aa14.63□□□□□ -0.07
RTN4-207ENST00000402434 C21orf62Q9NYP8 219 aa14.63□□□□□ -0.07
RTN4-207ENST00000402434 PEMTQ9UBM1 199 aa14.63□□□□□ -0.07
RTN4-207ENST00000402434 DUXBA0A1W2PPF3 345 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 F8W735 103 aaPredicted RBP14.62□□□□□ -0.07
RTN4-207ENST00000402434 I3L2K1 104 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 SFT2D2O95562 160 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 SULT1A3P0DMM9 295 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 SULT1A4P0DMN0 295 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 ANKRD55Q3KP44 614 aa14.62□□□□□ -0.07
RTN4-207ENST00000402434 IGHV3-21A0A0B4J1V1 117 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 RNASE2P10153 161 aaKnown RBP14.61□□□□□ -0.07
RTN4-207ENST00000402434 HOXA1P49639 335 aaPredicted RBP14.61□□□□□ -0.07
RTN4-207ENST00000402434 BSXQ3C1V8 233 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 FAM106AQ4KMX7 169 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 PLET1Q6UQ28 207 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 MISP3Q96FF7 219 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 BSCL2Q96G97 398 aaPredicted RBP14.61□□□□□ -0.07
RTN4-207ENST00000402434 ENY2Q9NPA8 101 aa14.61□□□□□ -0.07
RTN4-207ENST00000402434 A0A1B0GU03 582 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 TGOLN2O43493 480 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 SPNP16150 400 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 FCGR2BP31994 310 aaPredicted RBP14.6□□□□□ -0.07
RTN4-207ENST00000402434 SMCO1Q147U7 214 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 SPSB3Q6PJ21 355 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 ADAMTSL5Q6ZMM2 481 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 PRR25Q96S07 402 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 FLVCR2Q9UPI3 526 aa14.6□□□□□ -0.07
RTN4-207ENST00000402434 OR2T8A6NH00 312 aa14.59□□□□□ -0.07
RTN4-207ENST00000402434 LYRM1O43325 122 aa14.59□□□□□ -0.07
RTN4-207ENST00000402434 MT-CO2P00403 227 aa14.59□□□□□ -0.07
RTN4-207ENST00000402434 SUB1P53999 127 aaKnown RBP eCLIP14.59□□□□□ -0.071e-15■□□□□ 9.4
RTN4-207ENST00000402434 ZNF436Q9C0F3 470 aaPredicted RBP14.59□□□□□ -0.07
RTN4-207ENST00000402434 ZC4H2Q9NQZ6 224 aa14.59□□□□□ -0.07
RTN4-207ENST00000402434 GAR1Q9NY12 217 aaKnown RBP14.59□□□□□ -0.07
RTN4-207ENST00000402434 C9orf170A2RU37 121 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 A8MWP6 167 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 ADMP35318 185 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 MFAP4P55083 255 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 TNFRSF9Q07011 255 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 HAPLN4Q86UW8 402 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 TXN2Q99757 166 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 HSPB7Q9UBY9 170 aa14.58□□□□□ -0.08
RTN4-207ENST00000402434 LSM4Q9Y4Z0 139 aaKnown RBP14.58□□□□□ -0.08
RTN4-207ENST00000402434 C2orf70A6NJV1 201 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 CORTO00230 105 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 PITX3O75364 302 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 CTSGP08311 255 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 SLC25A6P12236 298 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 DCTN2Q13561 401 aaKnown RBP14.57□□□□□ -0.08
RTN4-207ENST00000402434 DEFB121Q5J5C9 76 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 UNQ9165/PRO28630Q6UXU0 137 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 CHRDL1Q9BU40 450 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 HEYLQ9NQ87 328 aaPredicted RBP14.57□□□□□ -0.08
RTN4-207ENST00000402434 TMED3Q9Y3Q3 217 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 ZNF320A2RRD8 509 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 TMEM213A2RRL7 107 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 CEBPZOSA8MTT3 80 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 OR4E1P0C645 316 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 FOLR2P14207 255 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 HTR2BP41595 481 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 Q56UQ5 140 aa14.57□□□□□ -0.08
RTN4-207ENST00000402434 PINX1Q96BK5 328 aaKnown RBP14.57□□□□□ -0.08
RTN4-207ENST00000402434 IGHV3-35A0A0C4DH35 117 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 GP9P14770 177 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 CBLN1P23435 193 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 DHRS2Q13268 280 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 C2orf83Q53S99 150 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 UBAC2Q8NBM4 344 aa14.56□□□□□ -0.08
RTN4-207ENST00000402434 WDR12Q9GZL7 423 aaKnown RBP14.56□□□□□ -0.08
RTN4-207ENST00000402434 NXPH3O95157 252 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 LY86O95711 162 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 IGHV3-48P01763 117 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 ANXA7P20073 488 aaKnown RBP14.55□□□□□ -0.08
RTN4-207ENST00000402434 ELLP55199 621 aaPredicted RBP14.55□□□□□ -0.08
RTN4-207ENST00000402434 LYG2Q86SG7 212 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 OR2K2Q8NGT1 345 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 ZNF414Q96IQ9 312 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 HIPK2Q9H2X6 1198 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 PALMDQ9NP74 551 aa14.55□□□□□ -0.08
RTN4-207ENST00000402434 NDUFA4O00483 81 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 NUPL2O15504 423 aaKnown RBP14.54□□□□□ -0.08
RTN4-207ENST00000402434 TCRBP04435 133 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 EDN2P20800 178 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 ZNF846Q147U1 533 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 DEFB114Q30KQ6 69 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 DUSP18Q8NEJ0 188 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 SLC24A4Q8NFF2 622 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 OR1S1Q8NH92 325 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 TMEM190Q8WZ59 177 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 C20orf85Q9H1P6 137 aa14.54□□□□□ -0.08
RTN4-207ENST00000402434 FNDC4Q9H6D8 234 aaPredicted RBP14.54□□□□□ -0.08
RTN4-207ENST00000402434 TECRQ9NZ01 308 aaKnown RBP14.54□□□□□ -0.08
RTN4-207ENST00000402434 C8orf88P0DMB2 117 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 NPBWR1P48145 328 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 C4orf46Q504U0 113 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 TM4SF20Q53R12 229 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 LCN12Q6JVE5 192 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 COQ8AQ8NI60 647 aa14.53□□□□□ -0.08
RTN4-207ENST00000402434 TMEM170AQ8WVE7 144 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms