RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 C1QTNF4Q9BXJ3 329 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 hCG_38984A0A1B0GV85 526 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 FOXS1O43638 330 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 NUP35Q8NFH5 326 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 OR4A5Q8NH83 315 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 RPP25Q9BUL9 199 aaKnown RBP8.36□□□□□ -1.07
PTPRM-203ENST00000400060 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
PTPRM-203ENST00000400060 SCN10AQ9Y5Y9 1956 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 IGKV1D-13A0A0B4J2D9 117 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 C2CD4DB7Z1M9 353 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 IGKV1-13P0DP09 117 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 COL9A1P20849 921 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF718Q3SXZ3 478 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 ENSAO43768 121 aaKnown RBP8.35□□□□□ -1.07
PTPRM-203ENST00000400060 PTGDSP41222 190 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 RNPS1Q15287 305 aaKnown RBP8.35□□□□□ -1.07
PTPRM-203ENST00000400060 NRN1LQ496H8 165 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 ARTNQ5T4W7 220 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 R4GN57 208 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 OR2H2O95918 312 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 CTRLP40313 264 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 PAX9P55771 341 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 MIR17HGQ75NE6 70 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 MGST2Q99735 147 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 NRTNQ99748 197 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 TRGV8A0A0C4DH27 118 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 WNT2P09544 360 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 TM4SF20Q53R12 229 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 SLC25A53Q5H9E4 307 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 SCARF2Q96GP6 870 aaPredicted RBP8.35□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
PTPRM-203ENST00000400060 PIKFYVEQ9Y2I7 2098 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 RRHO14718 337 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF688P0C7X2 276 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 LGALS3P17931 250 aaKnown RBP8.34□□□□□ -1.07
PTPRM-203ENST00000400060 LPAL2Q16609 132 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 FAM222BQ8WU58 562 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 TRAV8-6A0A0B4J262 113 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 A0A1W2PRD5 423 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 A0A1W2PRF3 423 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 A0A1W2PRM7 423 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 K7EQS6 105 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 IGHV3-7P01780 117 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 CCDC144NLQ6NUI1 221 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 ZNF488Q96MN9 340 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 FOXC2Q99958 501 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 FAM60AQ9NP50 221 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 PPP1R17O96001 155 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 PSG4Q00888 419 aa8.34□□□□□ -1.07
PTPRM-203ENST00000400060 YLPM1P49750 1951 aaKnown RBP8.34□□□□□ -1.08
PTPRM-203ENST00000400060 LYZP61626 148 aa8.34□□□□□ -1.08
PTPRM-203ENST00000400060 OR10J6PQ8NGY7 276 aa8.34□□□□□ -1.08
PTPRM-203ENST00000400060 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.08
PTPRM-203ENST00000400060 TMEM160Q9NX00 188 aa8.34□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV5-51A0A0C4DH38 117 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 PLNP26678 52 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 PMVKQ15126 192 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TMEM92Q6UXU6 159 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 Q6ZS52 159 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 HAPLN4Q86UW8 402 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TDHQ8IZJ6 230 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 LYZL4Q96KX0 146 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 PNRC2Q9NPJ4 139 aaKnown RBP8.33□□□□□ -1.08
PTPRM-203ENST00000400060 RAXQ9Y2V3 346 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TP53BP1Q12888 1972 aaPredicted RBP8.33□□□□□ -1.08
PTPRM-203ENST00000400060 DEFB108AA8MXU0 73 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 TDRG1Q3Y452 100 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 C16orf54Q6UWD8 224 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 C8orf86Q6ZUL3 223 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 IFI27L2Q9H2X8 130 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 WDR81Q562E7 1941 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 DOCK3Q8IZD9 2030 aa8.33□□□□□ -1.08
PTPRM-203ENST00000400060 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
PTPRM-203ENST00000400060 SGK494Q96LW2 274 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 C1orf147Q96MC9 270 aaPredicted RBP8.32□□□□□ -1.08
PTPRM-203ENST00000400060 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV1OR21-1A0A087WYE8 117 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV3-43A0A0B4J1X8 118 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 SHISA9B4DS77 424 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 SYNGR3O43761 229 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 IGHV3-43DP0DP04 118 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 C5orf64Q2M2E5 130 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 SPATA46Q5T0L3 261 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 A0A096LPE4 126 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 A0A1W2PPZ6 126 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 CELA3AP09093 270 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 ZNF714Q96N38 554 aa8.32□□□□□ -1.08
PTPRM-203ENST00000400060 GPHA2Q96T91 129 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms