RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 SCTP09683 121 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 DLL3Q9NYJ7 618 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 NAPSAO96009 420 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 CBLN1P23435 193 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 GGTLC1Q9BX51 225 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 CLDN16Q9Y5I7 305 aa9.26□□□□□ -0.93
CACNA1C-216ENST00000399638 P2RY1P47900 373 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 MESP2Q0VG99 397 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 UNC119Q13432 240 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 PAX1P15863 534 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 F5H768 121 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 ATP5LO75964 103 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 TNFRSF6BO95407 300 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 ESDP10768 282 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 IGHV1-2P23083 117 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 TCF23Q7RTU1 214 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 A0A1W2PPV9 198 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 CD59P13987 128 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 LRTM2Q8N967 370 aa9.25□□□□□ -0.93
CACNA1C-216ENST00000399638 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 H3BUX3 64 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 IGF2P01344 180 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 RPL39P5Q59GN2 51 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 NABP2Q9BQ15 211 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 OR11H12B2RN74 326 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 CD5LO43866 347 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 ICAM4Q14773 271 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 NPIPB9F8W1W9 429 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 NDUFB4O95168 129 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 TMEM50AO95807 157 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 RCC1P18754 421 aaPredicted RBP9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 TRAV12-1A0A0B4J245 112 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 H0Y980 276 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 H3BQ15 152 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 SMCHD1A6NHR9 2005 aa9.24□□□□□ -0.93
CACNA1C-216ENST00000399638 TRAV24A0A0B4J272 114 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 IGKV1D-16P01601 117 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 DEFB130BP0DP73 79 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 DEFB130AP0DP74 79 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 VSIG8P0DPA2 414 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 RPS11P62280 158 aaKnown RBP eCLIP9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 AICDAQ9GZX7 198 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 TGIF2-C20orf24A0A0A6YYL0 155 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 EVI2AP22794 236 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 LINC00305Q7Z4B0 112 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 TRGV1A0A0A0MS02 117 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 FAM74A7A6NL05 159 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 FAM74A3Q4VXF1 159 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 WDR82Q6UXN9 313 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 MCRIP2Q9BUT9 160 aaKnown RBP9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 TMEM126AQ9H061 195 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 SCN1AP35498 2009 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 A0A0G2JMM0 328 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 A0A1W2PPB8 328 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 A0A1W2PRS3 328 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 KIR3DP1A8MWS1 328 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 NPIPB4C9JG80 1138 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 SRIP30626 198 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 CTAG1AP78358 180 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 RHOGP84095 191 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 NBR2O15453 112 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 DAD1P61803 113 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 TMEM30BQ3MIR4 351 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 TCF24Q7RTU0 167 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 WDYHV1Q96HA8 205 aa9.23□□□□□ -0.93
CACNA1C-216ENST00000399638 PTGDSP41222 190 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 KLRD1Q13241 179 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 TEX45Q8NA69 505 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 PKIBQ9C010 78 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 MSGN1A6NI15 193 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 RAMP1O60894 148 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 FOLR2P14207 255 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 FSTP19883 344 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 COX19Q49B96 90 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 ANKRD39Q53RE8 183 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 GAGE2AQ6NT46 116 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 C22orf46C9J442 243 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 EWSR1Q01844 656 aaKnown RBP eCLIP9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 TRBV5-5A0A0J9YX44 114 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 NDUFS8O00217 210 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 HSPE1P61604 102 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 DICER1Q9UPY3 1922 aaKnown RBP9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 A0A1W2PR77 199 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 RARRES2Q99969 163 aa9.22□□□□□ -0.93
CACNA1C-216ENST00000399638 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms