RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 OSR1Q8TAX0 266 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 PARLQ9H300 379 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 ERVH48-1M5A8F1 160 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 ZNF318Q5VUA4 2279 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 TMEM218A2RU14 115 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 TSPAN13O95857 204 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 IGLV3-12A0A075B6K2 115 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 E7EQL1 145 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 CENPWQ5EE01 88 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 CD55P08174 381 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 RAB9AP51151 201 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 MORN2Q502X0 79 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 PSME4Q14997 1843 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 SLC17A3O00476 420 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 SNAI2O43623 268 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 C1orf100Q5SVJ3 147 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 OR52E5Q8NH55 327 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 Q9H3A6 140 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 PLSCR4Q9NRQ2 329 aa11.47□□□□□ -0.57
CACNA1C-211ENST00000399617 ZNF815PA8K554 130 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 MRPL18Q9H0U6 180 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 MRPS18AQ9NVS2 196 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 LINC00205P59089 165 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 CR1LQ2VPA4 569 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 LURAP1LQ8IV03 231 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 NDUFA3O95167 84 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 EVI2AP22794 236 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 PGPEP1Q9NXJ5 209 aa11.46□□□□□ -0.57
CACNA1C-211ENST00000399617 PQLC2LA1A4F0 135 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 TMEM178BH3BS89 294 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 PEX7O00628 323 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 PKIAP61925 76 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 REC114Q7Z4M0 266 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 CRIPAKQ8N1N5 446 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 IGFBPL1Q8WX77 278 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 DOCK6Q96HP0 2047 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 TRGV1A0A0A0MS02 117 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 SCO2A0A1W2PP80 73 aa11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 PNRC1Q12796 327 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-211ENST00000399617 CEP290O15078 2479 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SPTBP11277 2137 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 PYYP10082 97 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SYNJ2BPP57105 145 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 H1FOOQ8IZA3 346 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 HSPB9Q9BQS6 159 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 CHRNA10Q9GZZ6 450 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 CHD5Q8TDI0 1954 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 TMEM14DPA8MWL7 114 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 C15orf32Q32M92 178 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 MBD3L4A6NDZ8 208 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 MBD3L3A6NE82 208 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 MBD3L5A6NJ08 208 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SRIP30626 198 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 NPC2P61916 151 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 MBD3L2Q8NHZ7 208 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 ZNF319Q9P2F9 582 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 DPRXA6NFQ7 191 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 A6NNC1 897 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 MPTX1A8MV57 137 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 FCN3O75636 299 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 CIRBPQ14011 172 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 OR11H4Q8NGC9 324 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SLC25A15Q9Y619 301 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 GAGE10A6NGK3 116 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 TBX6O95947 436 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SPAG8Q99932 426 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 IGKV1D-13A0A0B4J2D9 117 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 OR9G9P0C7N8 305 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 IGKV1-13P0DP09 117 aa11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 SLC25A39Q9BZJ4 359 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-211ENST00000399617 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 ICE1Q9Y2F5 2266 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 LINC00299Q6ZSB3 139 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 COX6CP09669 75 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 TMEM70Q9BUB7 260 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 MRPS18CQ9Y3D5 142 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 LEPP41159 167 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 CGB3P0DN86 165 aa11.44□□□□□ -0.58
CACNA1C-211ENST00000399617 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 SERF2P84101 59 aa11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 LRTM2Q8N967 370 aa11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 NUDT10Q8NFP7 164 aa11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 NUDT11Q96G61 164 aa11.43□□□□□ -0.58
CACNA1C-211ENST00000399617 SEC11BP0C7V7 166 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms