RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 TMEM14BQ9NUH8 114 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 OR51B2Q9Y5P1 312 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 COL8A2P25067 703 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 HSPE1P61604 102 aaKnown RBP9.58□□□□□ -0.88
COL25A1-202ENST00000399127 DLK1P80370 383 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 TREML4Q6UXN2 200 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 Q8N7P7 452 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 RNF24Q9Y225 148 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 WDR83OSQ9Y284 106 aa9.58□□□□□ -0.88
COL25A1-202ENST00000399127 MDKP21741 143 aaPredicted RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 PATZ1Q9HBE1 687 aaKnown RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 RALYQ9UKM9 306 aaKnown RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 FOXA2Q9Y261 457 aaPredicted RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 LOC105371242A0A075B767 164 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 CTXND1A0A1B0GTU2 59 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 PRSS46E5RG02 174 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 C17orf112F2Z3M2 114 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 SCGB1D1O95968 90 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 CA2P00918 260 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 SAA1P0DJI8 122 aaPredicted RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 EFNB3Q15768 340 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 FBXL19-AS1Q494R0 122 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 FAM90A2PQ658T7 463 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
COL25A1-202ENST00000399127 SSMEM1Q8WWF3 244 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 ENY2Q9NPA8 101 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
COL25A1-202ENST00000399127 PLXNB1O43157 2135 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 J3QR06 171 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 M0QZ24 198 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 NPY1RP25929 384 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 PDLIM3Q53GG5 364 aaPredicted RBP9.56□□□□□ -0.88
COL25A1-202ENST00000399127 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 HARBI1Q96MB7 349 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 MGST2Q99735 147 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 VAX2Q9UIW0 290 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 TMEM30BQ3MIR4 351 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 Q5PR19 223 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 OR10W1Q8NGF6 305 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 OR4X1Q8NH49 305 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 TVP23CQ96ET8 276 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 AURKAIP1Q9NWT8 199 aaPredicted RBP9.56□□□□□ -0.88
COL25A1-202ENST00000399127 SPTAN1Q13813 2472 aaKnown RBP9.56□□□□□ -0.88
COL25A1-202ENST00000399127 AKAP6Q13023 2319 aa9.56□□□□□ -0.88
COL25A1-202ENST00000399127 H0YJW9 148 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 UPK2O00526 184 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 APOA2P02652 100 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 CDC34P49427 236 aaPredicted RBP9.55□□□□□ -0.88
COL25A1-202ENST00000399127 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 MOB3BQ86TA1 216 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 GBGT1Q8N5D6 347 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 C1orf159Q96HA4 380 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 RNF2Q99496 336 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 PLEKHA3Q9HB20 300 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 ACACBO00763 2458 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 CFAP46Q8IYW2 2715 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 IGHV3-72A0A0B4J1Y9 119 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 TEX50A0A1B0GTY4 177 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 IFNA1P01562 189 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 MEF2BQ02080 365 aaPredicted RBP9.55□□□□□ -0.88
COL25A1-202ENST00000399127 POU2AF1Q16633 256 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 ZNF672Q499Z4 452 aaPredicted RBP9.55□□□□□ -0.88
COL25A1-202ENST00000399127 SLC35E1Q96K37 410 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
COL25A1-202ENST00000399127 KBTBD11O94819 623 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 NDUFB8O95169 186 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 IGHV1-8P0DP01 117 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 DLX6P56179 175 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-202ENST00000399127 TMEM95Q3KNT9 176 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 TMEM155Q4W5P6 130 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
COL25A1-202ENST00000399127 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 RPUSD4Q96CM3 377 aaKnown RBP9.54□□□□□ -0.88
COL25A1-202ENST00000399127 GGTLC1Q9BX51 225 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 PXMP4Q9Y6I8 212 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 ARHGAP32A7KAX9 2087 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 E7EUB6 86 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 PAGE4O60829 102 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 PSMB3P49720 205 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 UBE2G2P60604 165 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 OR4F5Q8NH21 305 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 TMEM18Q96B42 140 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 FLYWCH2Q96CP2 140 aaKnown RBP9.54□□□□□ -0.88
COL25A1-202ENST00000399127 RITA1Q96K30 269 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 OR4F4Q96R69 305 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
COL25A1-202ENST00000399127 PRCDQ00LT1 54 aa9.53□□□□□ -0.88
COL25A1-202ENST00000399127 C10orf55Q5SWW7 151 aa9.53□□□□□ -0.88
COL25A1-202ENST00000399127 OR5AN1Q8NGI8 311 aa9.53□□□□□ -0.88
COL25A1-202ENST00000399127 NAGKQ9UJ70 344 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms