RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 HIVEP2P31629 2446 aa13.12□□□□□ -0.31
CDH23-204ENST00000398792 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 IGF1P05019 195 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
CDH23-204ENST00000398792 IFITM2Q01629 132 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 FAM110DQ8TAY7 271 aaPredicted RBP13.11□□□□□ -0.31
CDH23-204ENST00000398792 TMEM68Q96MH6 324 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 SLA2Q9H6Q3 261 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 UQCC1Q9NVA1 299 aa13.11□□□□□ -0.31
CDH23-204ENST00000398792 UBE2L5PA0A1B0GUS4 154 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 CORTO00230 105 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 DEFA4P12838 97 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 CD69Q07108 199 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 AKIRIN2Q53H80 203 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 C19orf54Q5BKX5 351 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 OR1L6Q8NGR2 347 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 G3V318 75 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 CLDN34H7C241 214 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 OPRK1P41145 380 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 EIF5AP63241 154 aaKnown RBP13.1□□□□□ -0.31
CDH23-204ENST00000398792 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
CDH23-204ENST00000398792 SLC16A13Q7RTY0 426 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 MISP3Q96FF7 219 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
CDH23-204ENST00000398792 ZNF580Q9UK33 172 aa13.1□□□□□ -0.31
CDH23-204ENST00000398792 IGLV11-55A0A075B6I3 123 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 FNDC10F2Z333 226 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 AP4M1O00189 453 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
CDH23-204ENST00000398792 IFNA5P01569 189 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 PRH1P02810 166 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
CDH23-204ENST00000398792 SLC25A24Q6NUK1 477 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 BAP18Q8IXM2 172 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 OR5T1Q8NG75 326 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
CDH23-204ENST00000398792 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
CDH23-204ENST00000398792 ARV1Q9H2C2 271 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 ZNF702PQ9H963 129 aa13.09□□□□□ -0.31
CDH23-204ENST00000398792 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 TRIM77I1YAP6 450 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
CDH23-204ENST00000398792 HSD17B11Q8NBQ5 300 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 FANCD2OSQ96PS1 177 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 WDR61Q9GZS3 305 aaKnown RBP13.08□□□□□ -0.32
CDH23-204ENST00000398792 LINC00527Q9UJ94 153 aa13.08□□□□□ -0.32
CDH23-204ENST00000398792 HILS1P60008 231 aa13.07□□□□□ -0.32
CDH23-204ENST00000398792 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
CDH23-204ENST00000398792 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
CDH23-204ENST00000398792 NOL4LQ96MY1 436 aaPredicted RBP13.07□□□□□ -0.32
CDH23-204ENST00000398792 RPS10-NUDT3A0A1W2PQS6 291 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 CYB5BO43169 146 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 SOX15O60248 233 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 MT-CO2P00403 227 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 FAM157CP0CG43 387 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 MDKP21741 143 aaPredicted RBP13.06□□□□□ -0.32
CDH23-204ENST00000398792 RUNX1Q01196 453 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 AKR1C1Q04828 323 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 MLANAQ16655 118 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 KLK9Q2XQG4 91 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 TREML4Q6UXN2 200 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 PHYHIPLQ96FC7 376 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 SLC35E1Q96K37 410 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 KLK9Q9UKQ9 250 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 WDR83OSQ9Y284 106 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 NSD1Q96L73 2696 aaPredicted RBP13.06□□□□□ -0.32
CDH23-204ENST00000398792 MTORP42345 2549 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 I3L2K1 104 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 RNASE1P07998 156 aaKnown RBP13.06□□□□□ -0.32
CDH23-204ENST00000398792 FGF7P21781 194 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 GAMTQ14353 236 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 ALKAL2Q6UX46 152 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 Q8N2B8 174 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 TAF15Q92804 592 aaKnown RBP eCLIP13.06□□□□□ -0.32
CDH23-204ENST00000398792 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 NPVFQ9HCQ7 196 aa13.06□□□□□ -0.32
CDH23-204ENST00000398792 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 K7EIM0 57 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 RGS13O14921 159 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 TSPAN9O75954 239 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 HIST1H1BP16401 226 aaKnown RBP13.05□□□□□ -0.32
CDH23-204ENST00000398792 PPIFP30405 207 aaKnown RBP13.05□□□□□ -0.32
CDH23-204ENST00000398792 CFHR3Q02985 330 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 OR2T6Q8NHC8 308 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 TMED6Q8WW62 240 aa13.05□□□□□ -0.32
CDH23-204ENST00000398792 MRPL36Q9P0J6 103 aaKnown RBP13.05□□□□□ -0.32
CDH23-204ENST00000398792 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
CDH23-204ENST00000398792 IGHV3-21A0A0B4J1V1 117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms