RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 DEFA3P59666 94 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 BASP1P80723 227 aaKnown RBP0.89□□□□□ -2.27
CD47-203ENST00000398258 RUNX1Q01196 453 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 CDK10Q15131 360 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 KISS1Q15726 138 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 SPANXN3Q5MJ09 141 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 C7orf65Q6ZTY9 151 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 S100A7AQ86SG5 101 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 ZNF439Q8NDP4 499 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 OR8B3Q8NGG8 313 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 BORCS7Q96B45 105 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 TOMM6Q96B49 74 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 CHMP6Q96FZ7 201 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 NAA38Q9BRA0 125 aaKnown RBP0.89□□□□□ -2.27
CD47-203ENST00000398258 COMMD5Q9GZQ3 224 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 RNASE7Q9H1E1 156 aaKnown RBP0.89□□□□□ -2.27
CD47-203ENST00000398258 TLNRD1Q9H1K6 362 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 C11orf68Q9H3H3 251 aaKnown RBP0.89□□□□□ -2.27
CD47-203ENST00000398258 GLTPQ9NZD2 209 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 FBXO5Q9UKT4 447 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 BAIAP2Q9UQB8 552 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 SDK1Q7Z5N4 2213 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 TOPBP1Q92547 1522 aa0.89□□□□□ -2.27
CD47-203ENST00000398258 RALGAPA2Q2PPJ7 1873 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 HECW2Q9P2P5 1572 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 TRBV6-5A0A0K0K1A5 114 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 DPRXA6NFQ7 191 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 MRPS14O60783 128 aaKnown RBP0.88□□□□□ -2.27
CD47-203ENST00000398258 IFNA10P01566 189 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 TRGC1P0CF51 173 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 SMIM10L2AP0DMW4 78 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 SMIM10L2BP0DMW5 78 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 RPS4Y1P22090 263 aaKnown RBP0.88□□□□□ -2.27
CD47-203ENST00000398258 MRPS25P82663 173 aaKnown RBP0.88□□□□□ -2.27
CD47-203ENST00000398258 ZNF345Q14585 488 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 ELOBQ15370 118 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 SPA17Q15506 151 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 TMEM97Q5BJF2 176 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 FAM173BQ6P4H8 233 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 TERB2Q8NHR7 220 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 H1FXQ92522 213 aaKnown RBP0.88□□□□□ -2.27
CD47-203ENST00000398258 Q96M85 177 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 SIGMAR1Q99720 223 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 TMEM147Q9BVK8 224 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 CST9LQ9H4G1 147 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 RNF122Q9H9V4 155 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 PIK3C2GO75747 1445 aa0.88□□□□□ -2.27
CD47-203ENST00000398258 GLI3P10071 1580 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 ERCC6L2Q5T890 1561 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 BRWD1Q9NSI6 2320 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 PTPRBP23467 1997 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 TRAV9-1A0A075B6T8 112 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 ORC5O43913 435 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 OR2J2O76002 312 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 SERPINA1P01009 418 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 RPSAP08865 295 aaKnown RBP0.87□□□□□ -2.27
CD47-203ENST00000398258 SMIM17P0DL12 118 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 HSD11B1P28845 292 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 HOXA6P31267 233 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 NNATQ16517 81 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 C12orf74Q32Q52 190 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 UNQ6190/PRO20217Q6UXQ8 127 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 ZNF826PQ6ZT77 177 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 FP248Q71RG6 208 aaPredicted RBP0.87□□□□□ -2.27
CD47-203ENST00000398258 DEFB128Q7Z7B8 93 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 OR6V1Q8N148 313 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 CDC26Q8NHZ8 85 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 MCFD2Q8NI22 146 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 DNAJC9Q8WXX5 260 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 SCGB3A1Q96QR1 104 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 CMSS1Q9BQ75 279 aaKnown RBP0.87□□□□□ -2.27
CD47-203ENST00000398258 MRPL32Q9BYC8 188 aaKnown RBP0.87□□□□□ -2.27
CD47-203ENST00000398258 TRIM4Q9C037 500 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 YIPF3Q9GZM5 350 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 PSTPIP2Q9H939 334 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 IDI2-AS1Q9NZ38 188 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 MAST2Q6P0Q8 1798 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 CCDC88CQ9P219 2028 aa0.87□□□□□ -2.27
CD47-203ENST00000398258 GREB1Q4ZG55 1949 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 RP1L1Q8IWN7 2480 aaPredicted RBP0.86□□□□□ -2.27
CD47-203ENST00000398258 hADV38S2A0JD32 116 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 BUB1B-PAK6H3BSN5 160 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 SDCBPO00560 298 aaPredicted RBP0.86□□□□□ -2.27
CD47-203ENST00000398258 PDE6DO43924 150 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 ZNF682O95780 498 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 HTR1AP08908 422 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 UBBP0CG47 229 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 COX6A1P12074 109 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 MAGEA12P43365 314 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CAPZBP47756 277 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CDC42P60953 191 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 TAF1AQ15573 450 aaPredicted RBP0.86□□□□□ -2.27
CD47-203ENST00000398258 AKIRIN2Q53H80 203 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 MIR17HGQ75NE6 70 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CLVS1Q8IUQ0 354 aaPredicted RBP0.86□□□□□ -2.27
CD47-203ENST00000398258 OR51A2Q8NGJ7 313 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CT55Q8WUE5 264 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 TMEM106AQ96A25 262 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 PHB2Q99623 299 aa0.86□□□□□ -2.27
CD47-203ENST00000398258 CCDC90BQ9GZT6 254 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms