RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 DEFA5Q01523 94 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 DMRT1Q9Y5R6 373 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 FAM181BA6NEQ2 426 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 OR1P1Q8NH06 330 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 CYTL1Q9NRR1 136 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 ZNF355PQ9NSJ1 428 aa16.66■□□□□ 0.26
CPNE1-204ENST00000397443 TRAV41A0A0B4J266 112 aa16.65■□□□□ 0.26
CPNE1-204ENST00000397443 OPRK1P41145 380 aa16.65■□□□□ 0.26
CPNE1-204ENST00000397443 TTC9CQ8N5M4 171 aa16.65■□□□□ 0.26
CPNE1-204ENST00000397443 ATP5SQ99766 215 aa16.65■□□□□ 0.26
CPNE1-204ENST00000397443 ZNF114Q8NC26 417 aa16.64■□□□□ 0.26
CPNE1-204ENST00000397443 PRSS22Q9GZN4 317 aa16.64■□□□□ 0.26
CPNE1-204ENST00000397443 UBE2L5PA0A1B0GUS4 154 aa16.64■□□□□ 0.25
CPNE1-204ENST00000397443 NPIPB5A8MRT5 1133 aa16.64■□□□□ 0.25
CPNE1-204ENST00000397443 PRSS46E5RG02 174 aa16.64■□□□□ 0.25
CPNE1-204ENST00000397443 TAAR5O14804 337 aa16.64■□□□□ 0.25
CPNE1-204ENST00000397443 AP4M1O00189 453 aa16.63■□□□□ 0.25
CPNE1-204ENST00000397443 CRYGCP07315 174 aa16.63■□□□□ 0.25
CPNE1-204ENST00000397443 AKIRIN2Q53H80 203 aa16.63■□□□□ 0.25
CPNE1-204ENST00000397443 STPG2Q8N412 459 aa16.63■□□□□ 0.25
CPNE1-204ENST00000397443 ZNF702PQ9H963 129 aa16.63■□□□□ 0.25
CPNE1-204ENST00000397443 CRLF1O75462 422 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 FAM157CP0CG43 387 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 ATP5IP56385 69 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-204ENST00000397443 HILS1P60008 231 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 HSD17B11Q8NBQ5 300 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 MS4A10Q96PG2 267 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 FNDC4Q9H6D8 234 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-204ENST00000397443 SOX15O60248 233 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 IGF1P05019 195 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 SLC51BQ86UW2 128 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 OR2T6Q8NHC8 308 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 FAM110DQ8TAY7 271 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-204ENST00000397443 TMEM147Q9BVK8 224 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 UQCC1Q9NVA1 299 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 S4R3C0 116 aa16.62■□□□□ 0.25
CPNE1-204ENST00000397443 NIPBLQ6KC79 2804 aaeCLIP16.61■□□□□ 0.251e-8■□□□□ 10.5
CPNE1-204ENST00000397443 SETD2Q9BYW2 2564 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-204ENST00000397443 BORCS7-ASMTA0A0B4J1R7 106 aa16.61■□□□□ 0.25
CPNE1-204ENST00000397443 DFFBO76075 338 aa16.61■□□□□ 0.25
CPNE1-204ENST00000397443 SRSF2Q01130 221 aaKnown RBP16.61■□□□□ 0.25
CPNE1-204ENST00000397443 RNASEH2CQ8TDP1 164 aaKnown RBP16.61■□□□□ 0.25
CPNE1-204ENST00000397443 OR2J3O76001 311 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 MT-CO2P00403 227 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 IFNA5P01569 189 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 UBA52P62987 128 aaKnown RBP16.6■□□□□ 0.25
CPNE1-204ENST00000397443 AKR1C1Q04828 323 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 CD69Q07108 199 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 ZNF266Q14584 549 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 SLC16A13Q7RTY0 426 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 ACY3Q96HD9 319 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 FANCD2OSQ96PS1 177 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 JTBO76095 146 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 CFDP00746 253 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-204ENST00000397443 ZNF329Q86UD4 541 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 ST8SIA2Q92186 375 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 TMEM68Q96MH6 324 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 RFNGQ9Y644 331 aa16.6■□□□□ 0.25
CPNE1-204ENST00000397443 CLDN34H7C241 214 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 CRYBA1P05813 215 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 DLK1P80370 383 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 RUNX1Q01196 453 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 ATP6V1FQ16864 119 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 JMJD1CQ15652 2540 aa16.59■□□□□ 0.25
CPNE1-204ENST00000397443 IGLV11-55A0A075B6I3 123 aa16.58■□□□□ 0.25
CPNE1-204ENST00000397443 RNASE1P07998 156 aaKnown RBP16.58■□□□□ 0.25
CPNE1-204ENST00000397443 TPT1P13693 172 aaKnown RBP16.58■□□□□ 0.25
CPNE1-204ENST00000397443 CRIP2P52943 208 aaPredicted RBP16.58■□□□□ 0.25
CPNE1-204ENST00000397443 GAMTQ14353 236 aa16.58■□□□□ 0.25
CPNE1-204ENST00000397443 C19orf54Q5BKX5 351 aa16.58■□□□□ 0.25
CPNE1-204ENST00000397443 MRPL36Q9P0J6 103 aaKnown RBP16.58■□□□□ 0.25
CPNE1-204ENST00000397443 CORTO00230 105 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 SCAF4O95104 1147 aaKnown RBP16.58■□□□□ 0.24
CPNE1-204ENST00000397443 PVRIGQ6DKI7 326 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 LCNL1Q6ZST4 164 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 OR1L6Q8NGR2 347 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 SCGB1C1Q8TD33 95 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 SLC35E1Q96K37 410 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 SH3BGRL3Q9H299 93 aa16.58■□□□□ 0.24
CPNE1-204ENST00000397443 NDUFB8O95169 186 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 IGHV3-23P01764 117 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 FGF7P21781 194 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 IFITM2Q01629 132 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 C10orf99Q6UWK7 81 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 ALKAL2Q6UX46 152 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 TREML4Q6UXN2 200 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 Q6ZSV7 163 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 BAP18Q8IXM2 172 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 UBAC2Q8NBM4 344 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 RSG1Q9BU20 258 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 FBXL7Q9UJT9 491 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 I3L2K1 104 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 K7EIM0 57 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 CYB5BO43169 146 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 PPIFP30405 207 aaKnown RBP16.57■□□□□ 0.24
CPNE1-204ENST00000397443 RND2P52198 227 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 RHOGP84095 191 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 EXOSC2Q13868 293 aaKnown RBP16.57■□□□□ 0.24
CPNE1-204ENST00000397443 JMJD8Q96S16 334 aa16.57■□□□□ 0.24
CPNE1-204ENST00000397443 GGACTQ9BVM4 153 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms