RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GGACTQ9BVM4 153 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 MLANAQ16655 118 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 ARSJQ5FYB0 599 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-203ENST00000397442 Q71RC1 249 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-203ENST00000397442 DUX5Q96PT3 197 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 FNDC4Q9H6D8 234 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-203ENST00000397442 UQCC1Q9NVA1 299 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 CDC42EP3Q9UKI2 254 aa21.63■■□□□ 1.05
CPNE1-203ENST00000397442 EXOSC2Q13868 293 aaKnown RBP21.62■■□□□ 1.05
CPNE1-203ENST00000397442 C19orf54Q5BKX5 351 aa21.62■■□□□ 1.05
CPNE1-203ENST00000397442 GINS3Q9BRX5 216 aa21.62■■□□□ 1.05
CPNE1-203ENST00000397442 UBE2L5PA0A1B0GUS4 154 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 G3V318 75 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 RGS13O14921 159 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 MDKP21741 143 aaPredicted RBP21.61■■□□□ 1.05
CPNE1-203ENST00000397442 CD69Q07108 199 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 ECSCRQ19T08 205 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 AKIRIN2Q53H80 203 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 UNQ5815/PRO19632Q6UWF5 114 aa21.61■■□□□ 1.05
CPNE1-203ENST00000397442 IGF1P05019 195 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 SRD5A1P18405 259 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 EIF5AP63241 154 aaKnown RBP21.6■■□□□ 1.05
CPNE1-203ENST00000397442 ALKAL2Q6UX46 152 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 RBMS3Q6XE24 437 aaKnown RBP21.6■■□□□ 1.05
CPNE1-203ENST00000397442 SLC35E3Q7Z769 313 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 HSD17B11Q8NBQ5 300 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 PARD6GQ9BYG4 376 aaPredicted RBP21.6■■□□□ 1.05
CPNE1-203ENST00000397442 PRH1P02810 166 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 OR5T1Q8NG75 326 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 FANCD2OSQ96PS1 177 aa21.6■■□□□ 1.05
CPNE1-203ENST00000397442 WDR61Q9GZS3 305 aaKnown RBP21.6■■□□□ 1.05
CPNE1-203ENST00000397442 DNAJC9-AS1A6NH13 148 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 FNDC10F2Z333 226 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 IFNA5P01569 189 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 DEFA4P12838 97 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 SCGB2A2Q13296 93 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 SLC25A24Q6NUK1 477 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 FAM110DQ8TAY7 271 aaPredicted RBP21.59■■□□□ 1.05
CPNE1-203ENST00000397442 CACNG8Q8WXS5 425 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 PHYHIPLQ96FC7 376 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 MISP3Q96FF7 219 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 TMEM68Q96MH6 324 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 ESM1Q9NQ30 184 aa21.59■■□□□ 1.05
CPNE1-203ENST00000397442 GPX4P36969 197 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-203ENST00000397442 OPRK1P41145 380 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 RUNX1Q01196 453 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 TREML4Q6UXN2 200 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 SH3BGRL3Q9H299 93 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 LINC00527Q9UJ94 153 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 WDR83OSQ9Y284 106 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 RFNGQ9Y644 331 aa21.58■■□□□ 1.05
CPNE1-203ENST00000397442 IGLV11-55A0A075B6I3 123 aa21.57■■□□□ 1.04
CPNE1-203ENST00000397442 ATP6V0CP27449 155 aa21.57■■□□□ 1.04
CPNE1-203ENST00000397442 GAMTQ14353 236 aa21.57■■□□□ 1.04
CPNE1-203ENST00000397442 SLC16A13Q7RTY0 426 aa21.57■■□□□ 1.04
CPNE1-203ENST00000397442 OR1L6Q8NGR2 347 aa21.57■■□□□ 1.04
CPNE1-203ENST00000397442 TRAV41A0A0B4J266 112 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 INAFM1C9JVW0 142 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 CORTO00230 105 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 IFNA7P01567 189 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 SPP1P10451 314 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 TMED6Q8WW62 240 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 TAF15Q92804 592 aaKnown RBP eCLIP21.56■■□□□ 1.041e-6■□□□□ 9.7
CPNE1-203ENST00000397442 SMCO3A2RU48 225 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 I3L2K1 104 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 SOX15O60248 233 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 KLK9Q2XQG4 91 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 ZNF767PQ75MW2 155 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 OR2T6Q8NHC8 308 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 NPVFQ9HCQ7 196 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 PLA2G2EQ9NZK7 142 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 MRPL36Q9P0J6 103 aaKnown RBP21.56■■□□□ 1.04
CPNE1-203ENST00000397442 KLK9Q9UKQ9 250 aa21.56■■□□□ 1.04
CPNE1-203ENST00000397442 NSD1Q96L73 2696 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-203ENST00000397442 IGHV3-48P01763 117 aa21.55■■□□□ 1.04
CPNE1-203ENST00000397442 SCGB1C1Q8TD33 95 aa21.55■■□□□ 1.04
CPNE1-203ENST00000397442 NOL4LQ96MY1 436 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-203ENST00000397442 NPFFR1Q9GZQ6 430 aa21.55■■□□□ 1.04
CPNE1-203ENST00000397442 LSM4Q9Y4Z0 139 aaKnown RBP21.55■■□□□ 1.04
CPNE1-203ENST00000397442 MT-CO2P00403 227 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 FGF7P21781 194 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 SCARB1Q8WTV0 552 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 RSG1Q9BU20 258 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 SLC25A32Q9H2D1 315 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 ZNF702PQ9H963 129 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 ZNF580Q9UK33 172 aa21.54■■□□□ 1.04
CPNE1-203ENST00000397442 K7EIM0 57 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 AP4M1O00189 453 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 FAM74A1Q5RGS3 127 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 BTNL8Q6UX41 500 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 UBQLN2Q9UHD9 624 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 IGKV1OR2-108A0A075B7D4 117 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 IGHV3-21A0A0B4J1V1 117 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 CLDN34H7C241 214 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 SEC11BP0C7V7 166 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 AKR1C1Q04828 323 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 TMEM95Q3KNT9 176 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 TMEM144Q7Z5S9 345 aa21.53■■□□□ 1.04
CPNE1-203ENST00000397442 GNPNAT1Q96EK6 184 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-203ENST00000397442 PRSS22Q9GZN4 317 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms