RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 PRB3Q04118 309 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 CD69Q07108 199 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF672Q499Z4 452 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 CT83Q5H943 113 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 SSMEM1Q8WWF3 244 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZFAND3Q9H8U3 227 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR51B2Q9Y5P1 312 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF705FA8MVS1 300 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 NDUFB3O43676 98 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF705DP0CH99 300 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF705BP0CI00 300 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 RPL23P62829 140 aaKnown RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 MRGPRG-AS1Q2M3A8 158 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 KCNIP4Q6PIL6 250 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR51G1Q8NGK1 321 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 COMMD5Q9GZQ3 224 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 SERTAD4Q9NUC0 356 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 PITPNC1Q9UKF7 332 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 TEX50A0A1B0GTY4 177 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ODF3BA8MYP8 253 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 TOX4O94842 621 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 NDUFA3O95167 84 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 IGHV3-48P01763 117 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR4A8P0C604 315 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 HOXB4P17483 251 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 MYCNOSP40205 109 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 PRRX1P54821 245 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 FAM209BQ5JX69 171 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF841Q6ZN19 808 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZCCHC24Q8N2G6 241 aaKnown RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 SOX21Q9Y651 276 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF4-203ENST00000397087 FAM231BA6NCW3 169 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SLC35B1P78383 322 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 RPL19P84098 196 aaKnown RBP4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 DEFA6Q01524 100 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 S100A7AQ86SG5 101 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 PLEKHA3Q9HB20 300 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SLC35D1Q9NTN3 355 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TP53TG5Q9Y2B4 290 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 PXMP4Q9Y6I8 212 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 LAMA5O15230 3695 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 CFAP47Q6ZTR5 3102 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 OTOGLQ3ZCN5 2332 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 PGPEP1LA6NFU8 196 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 H7BYZ3 331 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SCGB1D1O95968 90 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 MT-ND6P03923 174 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 S100A7P31151 101 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 CRIP2P52943 208 aaPredicted RBP4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SRSF2Q01130 221 aaKnown RBP4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 VMA21Q3ZAQ7 101 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 MINOS1Q5TGZ0 78 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TMEM200BQ69YZ2 307 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 C11orf42Q8N5U0 333 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TMEM116Q8NCL8 245 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR4P4Q8NGL7 312 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR10G8Q8NGN5 311 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 Q8WTZ3 238 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 UHRF2Q96PU4 802 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TMEM133Q9H2Q1 129 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 OSTCQ9NRP0 149 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 KLF12Q9Y4X4 402 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 MINOS1-NBL1R4GNA1 71 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 DCHS1Q96JQ0 3298 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 PPP5D1E7EU14 171 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 CD3EP07766 207 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 IGHV1-8P0DP01 117 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 BSPH1Q075Z2 132 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 GFRALQ6UXV0 394 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 MMD2Q8IY49 270 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 LYPD1Q8N2G4 141 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 FAM210BQ96KR6 192 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TMEM68Q96MH6 324 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR51M1Q9H341 326 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 GAR1Q9NY12 217 aaKnown RBP4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 DOPEY2Q9Y3R5 2298 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SERTM2A0A1B0GWG4 89 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 GCHFRP30047 84 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TFF3Q07654 80 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 FOXC1Q12948 553 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SPNS3Q6ZMD2 512 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 TXN2Q99757 166 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 PARLQ9H300 379 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 ZNF492Q9P255 531 aa4.87□□□□□ -1.63
RAPGEF4-203ENST00000397087 SPTBN4Q9H254 2564 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 CACNA1AO00555 2505 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 ATMQ13315 3056 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 KLK10O43240 276 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 PAGE4O60829 102 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 ERHP84090 104 aaKnown RBP4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 OR1P1Q8NH06 330 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 ABHD17AQ96GS6 310 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 SAP30LQ9HAJ7 183 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 TBL2Q9Y4P3 447 aaKnown RBP4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 E7EQL1 145 aa4.86□□□□□ -1.63
RAPGEF4-203ENST00000397087 ISLRO14498 428 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms