RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TPTE2P1Q5T6R2 138 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 ADTRPQ96IZ2 230 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
TM9SF1-202ENST00000396854 OOSP1A8MZH6 123 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 SAA4P35542 130 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 KIR2DS2P43631 304 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 THBS3P49746 956 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 BPIFB3P59826 476 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 TGIF2LXQ8IUE1 241 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 DDB2Q92466 427 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 RPEQ96AT9 228 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 AJUBAQ96IF1 538 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 GGACTQ9BVM4 153 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 TRBV24-1A0A075B6N3 115 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CTXND1A0A1B0GTU2 59 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 MBP02144 154 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 TRGC2P03986 189 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 OPN1MWP04001 364 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CD81P60033 236 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 OR2B11Q5JQS5 317 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 CIB3Q96Q77 187 aaPredicted RBP11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
TM9SF1-202ENST00000396854 FOSL1P15407 271 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 REG1BP48304 166 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 LINC00205P59089 165 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 VWC2Q2TAL6 325 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 RUSC1-AS1Q66K80 236 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 ZNF383Q8NA42 475 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 DTD1Q8TEA8 209 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 NAT8Q9UHE5 227 aa11.92□□□□□ -0.5
TM9SF1-202ENST00000396854 IGHV3OR16-10A0A075B7F0 116 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 ELOA3CA0A087WX78 387 aaPredicted RBP11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 IGHV1-3A0A0C4DH29 117 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 A0A1W2PPI3 338 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 SEC14L6B5MCN3 397 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 GAR1Q9NY12 217 aaKnown RBP11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 FGF7P21781 194 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 S100A2P29034 98 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 BRD3OSQ6XYD6 125 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 H2BFWTQ7Z2G1 175 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
TM9SF1-202ENST00000396854 PHOX2AO14813 284 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 KBTBD11O94819 623 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 CD99P14209 185 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 MDKP21741 143 aaPredicted RBP11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 PSMB3P49720 205 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 DYNAPQ8N1N2 210 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 SMIM7Q9BQ49 75 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 ACANP16112 2415 aa11.9□□□□□ -0.5
TM9SF1-202ENST00000396854 H0YJW9 148 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 HPRT1P00492 218 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 SSX2Q16385 188 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 OR10G9Q8NGN4 311 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 OR10G7Q8NGN6 311 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 ABHD5Q8WTS1 349 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 CFHR4Q92496 578 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 FRZBQ92765 325 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 SSX3Q99909 188 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 SLC25A22Q9H936 323 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 TMEM160Q9NX00 188 aa11.9□□□□□ -0.51
TM9SF1-202ENST00000396854 CSPG4Q6UVK1 2322 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 PPP1R2P9O14990 202 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 FCGR3BO75015 233 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 TMEM241Q24JQ0 296 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 PYY3Q5JQD4 70 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 FFAR4Q5NUL3 377 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 HIST3H2BBQ8N257 126 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 OR4S2Q8NH73 311 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 NPCDR1Q9BY65 106 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 DMRT1Q9Y5R6 373 aa11.89□□□□□ -0.51
TM9SF1-202ENST00000396854 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms