RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ZNF114Q8NC26 417 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 FCAMRQ8WWV6 532 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 SLC25A46Q96AG3 418 aa12.78□□□□□ -0.36
EXOSC3-202ENST00000396521 I3L2K1 104 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 GNG7O60262 68 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 RLN1P04808 185 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 MIFP14174 115 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 ZNF124Q15973 351 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 CTF1Q16619 201 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 STHQ8IWL8 128 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 VSIRQ9H7M9 311 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 EHFQ9NZC4 300 aa12.77□□□□□ -0.37
EXOSC3-202ENST00000396521 IGKV3-7A0A075B6H7 116 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 G6PCP35575 357 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 RPS19P39019 145 aaKnown RBP12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 NPBWR1P48145 328 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 TMBIM6P55061 237 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 TAS2R46P59540 309 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 GBGT1Q8N5D6 347 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 Q8NAQ8 132 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 SLC25A38Q96DW6 304 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 MISP3Q96FF7 219 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 MS4A6AQ9H2W1 248 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 NSG2Q9Y328 171 aa12.76□□□□□ -0.37
EXOSC3-202ENST00000396521 A0A1W2PS18 150 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 MED14OSP0DP75 135 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 SPP1P10451 314 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 ERHP84090 104 aaKnown RBP12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 LPCAT3Q6P1A2 487 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 OR6F1Q8NGZ6 308 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 AP3S1Q92572 193 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 ZNF414Q96IQ9 312 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
EXOSC3-202ENST00000396521 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 GPR31O00270 319 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 DEFB4AO15263 64 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 XRCC3O43542 346 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 MT-CO2P00403 227 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 RORCP51449 518 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 DEFB131AP59861 70 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 RPL11P62913 178 aaKnown RBP12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 OR5H6Q8NGV6 325 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 OR4A16Q8NH70 328 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 S100A16Q96FQ6 103 aaKnown RBP12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 GRAMD2BQ96HH9 432 aa12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 ZNF2Q9BSG1 426 aaPredicted RBP12.74□□□□□ -0.37
EXOSC3-202ENST00000396521 HLA-DMBP28068 263 aa12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 PRCDQ00LT1 54 aa12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 H2BFWTQ7Z2G1 175 aa12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 VPS13DQ5THJ4 4388 aa12.73□□□□□ -0.37
EXOSC3-202ENST00000396521 ZNF705EA8MWA4 302 aaPredicted RBP12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 H3BMQ9 156 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 SCGB2A1O75556 95 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 RFX2P48378 723 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 SPCS2Q15005 226 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 PVRIGQ6DKI7 326 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 OR5H2Q8NGV7 314 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 ST8SIA2Q92186 375 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 ANAPC10Q9UM13 185 aa12.72□□□□□ -0.37
EXOSC3-202ENST00000396521 IGHV4-4A0A075B6R2 117 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 IGHV3OR16-13A0A075B7E8 117 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 IGHV3-74A0A0B4J1X5 117 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 IGHV4-28A0A0C4DH34 117 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 FCER2P06734 321 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 P0DMU3 169 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 FAM231AP0DMU4 169 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 FAM231CP0DMU5 169 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 NAT1P18440 290 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 NPPCP23582 126 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 LEMD1Q68G75 181 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 TRPT1Q86TN4 253 aaKnown RBP12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 SAMD12Q8N8I0 201 aa12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
EXOSC3-202ENST00000396521 DBX1A6NMT0 343 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 CORTO00230 105 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 RBMY1A1P0DJD3 496 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 RBMY1CP0DJD4 496 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 SNCAP37840 140 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 RBMY1FQ15415 496 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 NARS2Q96I59 477 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 SEC22AQ96IW7 307 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 CCDC59Q9P031 241 aaKnown RBP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 COMMD3Q9UBI1 195 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 RABAC1Q9UI14 185 aa12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 PUS1Q9Y606 427 aaKnown RBP eCLIP12.7□□□□□ -0.38
EXOSC3-202ENST00000396521 KIAA1109Q2LD37 5005 aa12.69□□□□□ -0.38
EXOSC3-202ENST00000396521 SMIM31A0A1B0GVY4 71 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms