RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CTRB2Q6GPI1 263 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
VAMP1-202ENST00000396308 CACNG8Q8WXS5 425 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
VAMP1-202ENST00000396308 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 CLDN34H7C241 214 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 SCGB2A1O75556 95 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 CRYBA1P05813 215 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 CRYGCP07315 174 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-202ENST00000396308 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
VAMP1-202ENST00000396308 RPL15P61313 204 aaKnown RBP12.16□□□□□ -0.46
VAMP1-202ENST00000396308 RAB31Q13636 194 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 RPL7L1Q6DKI1 246 aaKnown RBP12.16□□□□□ -0.46
VAMP1-202ENST00000396308 SLC16A13Q7RTY0 426 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 HAPLN4Q86UW8 402 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 ST8SIA2Q92186 375 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 KCNIP2Q9NS61 270 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 ZNF355PQ9NSJ1 428 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 FBXO7Q9Y3I1 522 aa12.16□□□□□ -0.46
VAMP1-202ENST00000396308 ZANQ9Y493 2812 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 PMS2P5A8MQ11 134 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 INAFM1C9JVW0 142 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 MPDU1O75352 247 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 IGF1P05019 195 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 FAM157CP0CG43 387 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 CD69Q07108 199 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-202ENST00000396308 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-202ENST00000396308 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-202ENST00000396308 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
VAMP1-202ENST00000396308 ZNF580Q9UK33 172 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
VAMP1-202ENST00000396308 NF1P21359 2839 aa12.15□□□□□ -0.47
VAMP1-202ENST00000396308 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 FGF7P21781 194 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 BLCAPP62952 87 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 SLC35B1P78383 322 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 OR5T1Q8NG75 326 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 TMEM170AQ8WVE7 144 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 NPVFQ9HCQ7 196 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 CYTL1Q9NRR1 136 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 ZFHX3Q15911 3703 aa12.14□□□□□ -0.47
VAMP1-202ENST00000396308 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 H3BUA1 57 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 EGR2P11161 476 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-202ENST00000396308 HILS1P60008 231 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 ASPHD1Q5U4P2 390 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 ZNF767PQ75MW2 155 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 OR2T6Q8NHC8 308 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
VAMP1-202ENST00000396308 WFDC1Q9HC57 220 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
VAMP1-202ENST00000396308 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
VAMP1-202ENST00000396308 PVRIGQ6DKI7 326 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
VAMP1-202ENST00000396308 ACY3Q96HD9 319 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 GINS3Q9BRX5 216 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
VAMP1-202ENST00000396308 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
VAMP1-202ENST00000396308 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 G3V318 75 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 TCF21O43680 179 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 SOX15O60248 233 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 CRLF1O75462 422 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 MT-CO2P00403 227 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 FABP1P07148 127 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 NECAP1Q8NC96 275 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 ZNF702PQ9H963 129 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
VAMP1-202ENST00000396308 FAM181BA6NEQ2 426 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 LINC01548A6NM66 108 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 SEC11BP0C7V7 166 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 MFAP2P55001 183 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 RAB14P61106 215 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 C19orf35Q6ZS72 473 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
VAMP1-202ENST00000396308 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms