RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 OR11H7Q8NGC8 314 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 OR4D5Q8NGN0 318 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 DCUN1D4Q92564 292 aa12.74□□□□□ -0.37
CXCL1-201ENST00000395761 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 RCC1LQ96I51 464 aaKnown RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
CXCL1-201ENST00000395761 IGHV3-23P01764 117 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 HIST1H1BP16401 226 aaKnown RBP12.73□□□□□ -0.37
CXCL1-201ENST00000395761 CXCL3P19876 107 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 H2BFSP57053 126 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 OR2C3Q8N628 320 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 OR1S1Q8NH92 325 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 NMES1Q9C002 83 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 RANGRFQ9HD47 186 aaPredicted RBP12.73□□□□□ -0.37
CXCL1-201ENST00000395761 HSPB7Q9UBY9 170 aa12.73□□□□□ -0.37
CXCL1-201ENST00000395761 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 SIX6O95475 246 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 IFNA17P01571 189 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
CXCL1-201ENST00000395761 SPCS3P61009 180 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 ASB13Q8WXK3 278 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
CXCL1-201ENST00000395761 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
CXCL1-201ENST00000395761 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.71□□□□□ -0.37
CXCL1-201ENST00000395761 MFSD2BA6NFX1 497 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 TNFRSF9Q07011 255 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 CCDC140Q96MF4 163 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.37
CXCL1-201ENST00000395761 PPP5D1E7EU14 171 aa12.7□□□□□ -0.38
CXCL1-201ENST00000395761 BMPR1BO00238 502 aa12.7□□□□□ -0.38
CXCL1-201ENST00000395761 NKX2-1P43699 371 aaPredicted RBP12.7□□□□□ -0.38
CXCL1-201ENST00000395761 BCAP31P51572 246 aa12.7□□□□□ -0.38
CXCL1-201ENST00000395761 KPRPQ5T749 579 aaPredicted RBP12.7□□□□□ -0.38
CXCL1-201ENST00000395761 CLEC19AQ6UXS0 136 aa12.7□□□□□ -0.38
CXCL1-201ENST00000395761 MCRIP2Q9BUT9 160 aaKnown RBP12.7□□□□□ -0.38
CXCL1-201ENST00000395761 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
CXCL1-201ENST00000395761 IGHV3-21A0A0B4J1V1 117 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 SEC14L6B5MCN3 397 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 OVOL1O14753 267 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 MED6O75586 246 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 NXPH3O95157 252 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 LY86O95711 162 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 MBPP02686 304 aaPredicted RBP12.69□□□□□ -0.38
CXCL1-201ENST00000395761 PRB2P02812 416 aaPredicted RBP12.69□□□□□ -0.38
CXCL1-201ENST00000395761 GIPP09681 153 aaPredicted RBP12.69□□□□□ -0.38
CXCL1-201ENST00000395761 ZP3P21754 424 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 ERHP84090 104 aaKnown RBP12.69□□□□□ -0.38
CXCL1-201ENST00000395761 DEFA6Q01524 100 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 KLF5Q13887 457 aaPredicted RBP12.69□□□□□ -0.38
CXCL1-201ENST00000395761 OR1P1Q8NH06 330 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 EEF1AKMT3Q96AZ1 226 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 THYN1Q9P016 225 aa12.69□□□□□ -0.38
CXCL1-201ENST00000395761 hCG_2014768A0A024R1R8 64 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 CYB5BO43169 146 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 SYNGR2O43760 224 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 HOXA1P49639 335 aaPredicted RBP12.68□□□□□ -0.38
CXCL1-201ENST00000395761 RAP2BP61225 183 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
CXCL1-201ENST00000395761 K7EIM0 57 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 CLEC3BP05452 202 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 RPEL1Q2QD12 228 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 OR1L6Q8NGR2 347 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 VN1R17PQ8TDU5 208 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 WDR89Q96FK6 387 aaPredicted RBP12.67□□□□□ -0.38
CXCL1-201ENST00000395761 RBKSQ9H477 322 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 ENY2Q9NPA8 101 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 ZC4H2Q9NQZ6 224 aa12.67□□□□□ -0.38
CXCL1-201ENST00000395761 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 K7EPK0 472 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 OR2C1O95371 312 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 RNASE2P10153 161 aaKnown RBP12.66□□□□□ -0.38
CXCL1-201ENST00000395761 ARL3P36405 182 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 SNCAP37840 140 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 POLR2GP62487 172 aaKnown RBP eCLIP12.66□□□□□ -0.38
CXCL1-201ENST00000395761 RAB32Q13637 225 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 MISP3Q96FF7 219 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
CXCL1-201ENST00000395761 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
CXCL1-201ENST00000395761 I3L2K1 104 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 WIPF1O43516 503 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 GGCTO75223 188 aaKnown RBP12.65□□□□□ -0.38
CXCL1-201ENST00000395761 IGHV3-48P01763 117 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 GPR183P32249 361 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 ATP5IP56385 69 aaPredicted RBP12.65□□□□□ -0.38
CXCL1-201ENST00000395761 TAS2R30P59541 319 aa12.65□□□□□ -0.38
CXCL1-201ENST00000395761 FAM209BQ5JX69 171 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms