RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 RTBDNQ9BSG5 229 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-203ENST00000394872 RALGAPA2Q2PPJ7 1873 aa8.68□□□□□ -1.02
COL4A6-203ENST00000394872 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
COL4A6-203ENST00000394872 DMRT1Q9Y5R6 373 aa8.68□□□□□ -1.02
COL4A6-203ENST00000394872 SEC16AO15027 2179 aa8.68□□□□□ -1.02
COL4A6-203ENST00000394872 SCN8AQ9UQD0 1980 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 IGHV1-46P01743 117 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 SMIM13P0DJ93 91 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 C3orf36Q3SXR2 165 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 OR5AN1Q8NGI8 311 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 LOC285556D6RIA3 1793 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 LYZL4Q96KX0 146 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 A0A1B0GTI1 187 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 ATP5LO75964 103 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 OTORQ9NRC9 128 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 TIMM23O14925 209 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 DUSP14O95147 198 aaKnown RBP8.67□□□□□ -1.02
COL4A6-203ENST00000394872 ATP5G3P48201 142 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 NHLRC3Q5JS37 347 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 TMEM42Q69YG0 159 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 FOXC2Q99958 501 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 HOXA5P20719 270 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 UNQ6494/PRO21346Q6UXR6 183 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 CIARTQ8N365 385 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-203ENST00000394872 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 FLVCR1-AS1Q8TAF5 88 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 CHD5Q8TDI0 1954 aa8.67□□□□□ -1.02
COL4A6-203ENST00000394872 SRD5A1P18405 259 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 OR10J3Q5JRS4 329 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 PVRIGQ6DKI7 326 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 TRBV6-7A0A0A0MS04 114 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 IGKV3D-20A0A0C4DH25 116 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 VMO1Q7Z5L0 202 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 IGLV3-32A0A0A0MS00 114 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 CNTFRP26992 372 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 ZNF672Q499Z4 452 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-203ENST00000394872 SLC50A1Q9BRV3 221 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 TPRP12270 2363 aaKnown RBP8.66□□□□□ -1.02
COL4A6-203ENST00000394872 TIMP3P35625 211 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 FAM131CQ96AQ9 280 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 MRPL16Q9NX20 251 aaKnown RBP8.66□□□□□ -1.02
COL4A6-203ENST00000394872 TRGV4A0A0C4DH28 118 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 SLC25A28Q96A46 364 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 LINC00527Q9UJ94 153 aa8.66□□□□□ -1.02
COL4A6-203ENST00000394872 GNG5P63218 68 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 LAIR2Q6ISS4 152 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 RNF125Q96EQ8 232 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 RP1P56715 2156 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 NDUFA3O95167 84 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 TSPAN13O95857 204 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 IGFBP3P17936 291 aaPredicted RBP8.65□□□□□ -1.02
COL4A6-203ENST00000394872 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 VGLL1Q99990 258 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 PGPEP1Q9NXJ5 209 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 MDC1Q14676 2089 aaKnown RBP8.65□□□□□ -1.02
COL4A6-203ENST00000394872 XIRP1Q702N8 1843 aaKnown RBP8.65□□□□□ -1.02
COL4A6-203ENST00000394872 SAP30O75446 220 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 EFNA4P52798 201 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 Q6AWC8 147 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 RAMP3O60896 148 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 WFDC12Q8WWY7 111 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 TRPM7Q96QT4 1865 aa8.65□□□□□ -1.02
COL4A6-203ENST00000394872 A0A1B0GW15 77 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 DPRXA6NFQ7 191 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 CRPP02741 224 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 LINC00271P0C7V0 271 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 SOX21Q9Y651 276 aaPredicted RBP8.65□□□□□ -1.03
COL4A6-203ENST00000394872 SHISA3A0PJX4 238 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 RBMY1BA6NDE4 496 aaKnown RBP8.65□□□□□ -1.03
COL4A6-203ENST00000394872 RBMY1EA6NEQ0 496 aaKnown RBP8.65□□□□□ -1.03
COL4A6-203ENST00000394872 RBMY1DP0C7P1 496 aaKnown RBP8.65□□□□□ -1.03
COL4A6-203ENST00000394872 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.03
COL4A6-203ENST00000394872 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 PAX8Q06710 450 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 FAM166AQ6J272 317 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 JKAMPQ9P055 326 aa8.65□□□□□ -1.03
COL4A6-203ENST00000394872 MPTX1A8MV57 137 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 IL18BPO95998 194 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 C18orf12Q96KH6 178 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 IMMP2LQ96T52 175 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 MESP1Q9BRJ9 268 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 FABP5P3A8MUU1 101 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ERVH48-1M5A8F1 160 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TCF23Q7RTU1 214 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 TMEM144Q7Z5S9 345 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 FGFBP3Q8TAT2 258 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ASCL2Q99929 193 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ZNF525Q8N782 197 aa8.64□□□□□ -1.03
COL4A6-203ENST00000394872 ABCA7Q8IZY2 2146 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms