RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 FAM90A26D6RGX4 464 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 IGKV1-16P04430 117 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 PLA2G2AP14555 144 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 RPUSD1Q9UJJ7 312 aaKnown RBP11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 SEC11CQ9BY50 192 aa11.44□□□□□ -0.58
PPP3CA-202ENST00000394853 UMAD1C9J7I0 102 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 PPOXP50336 477 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 DIAPH2-AS1Q14236 149 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 TMEM14EPQ6UXP3 125 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 SMIM12Q96EX1 92 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 FLNCQ14315 2725 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 CSMD1Q96PZ7 3565 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 NCBP2LA6PVI3 153 aaKnown RBP11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 FAM157AC9JC47 383 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 F6UZH7 168 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 FOXH1O75593 365 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 OR4S2Q8NH73 311 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 INSIG2Q9Y5U4 225 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 M0QXV9 152 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 CRYGCP07315 174 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 TFF3Q07654 80 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 PEA15Q15121 130 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 SPSB3Q6PJ21 355 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
PPP3CA-202ENST00000394853 PNKDQ8N490 385 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 TCTEX1D1Q8N7M0 179 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 TAF15Q92804 592 aaKnown RBP eCLIP11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 ZFP92A6NM28 416 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 FGF7P21781 194 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 GNB1P62873 340 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 GAGE1Q13065 139 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 OR4A47Q6IF82 309 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 SMIM20Q8N5G0 67 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 ZNF439Q8NDP4 499 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 C7orf69Q9H7B7 122 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 CT45A6P0DMU7 189 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 CT45A5P0DMU8 189 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 CT45A7P0DMV0 189 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 NDUFA6P56556 154 aa11.42□□□□□ -0.58
PPP3CA-202ENST00000394853 RTL8BQ17RB0 113 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 DDB2Q92466 427 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 PBDC1Q9BVG4 233 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 K7EQM0 130 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 RRHO14718 337 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 RELBQ01201 579 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 EAF1Q96JC9 268 aaPredicted RBP11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 SCRT1Q9BWW7 348 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 MRPL20Q9BYC9 149 aaKnown RBP11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 CARHSP1Q9Y2V2 147 aaKnown RBP11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 NOTCH3Q9UM47 2321 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 RAB9AP51151 201 aa11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 WDR25Q64LD2 544 aaPredicted RBP11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 SLC25A48Q6ZT89 311 aaKnown RBP11.41□□□□□ -0.58
PPP3CA-202ENST00000394853 RBFOX3A6NFN3 312 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 SRRM4A7MD48 611 aaKnown RBP11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 TFPI2P48307 235 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 THBS3P49746 956 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 LHX4Q969G2 390 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 CIB3Q96Q77 187 aaPredicted RBP11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 LOXP28300 417 aaPredicted RBP11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 PRDM13Q9H4Q3 707 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 SLC25A22Q9H936 323 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 RPS10P5Q9NQ39 176 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 TCF19Q9Y242 345 aa11.4□□□□□ -0.58
PPP3CA-202ENST00000394853 ZNF726P1Q15940 193 aa11.4□□□□□ -0.59
PPP3CA-202ENST00000394853 HEPN1Q6WQI6 88 aa11.4□□□□□ -0.59
PPP3CA-202ENST00000394853 PMS2P5A8MQ11 134 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 IGKV1D-33P01593 117 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 IGKV1-33P01594 117 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 ACSM6Q6P461 480 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 TMEM147Q9BVK8 224 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 SEC14L6B5MCN3 397 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 USF1P22415 310 aaPredicted RBP11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 C10orf91Q5T1B1 145 aa11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 PINX1Q96BK5 328 aaKnown RBP11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 PATZ1Q9HBE1 687 aaKnown RBP11.39□□□□□ -0.59
PPP3CA-202ENST00000394853 RBFOX2O43251 390 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■□□□□ 10.8
PPP3CA-202ENST00000394853 TOX4O94842 621 aa11.38□□□□□ -0.59
PPP3CA-202ENST00000394853 LFNGQ8NES3 379 aa11.38□□□□□ -0.59
PPP3CA-202ENST00000394853 SLC35B3Q9H1N7 401 aa11.38□□□□□ -0.59
PPP3CA-202ENST00000394853 KIAA1456Q9P272 454 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms