RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MS4A5Q9H3V2 200 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 ZDBF2Q9HCK1 2354 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 C2orf91Q6ZV80 131 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 MDP1Q86V88 176 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 AP1S3Q96PC3 154 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 AHCTF1Q8WYP5 2266 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 A0A087X0K7 114 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 A6NDN8 102 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 RPL30P62888 115 aaKnown RBP15.5■□□□□ 0.07
HOXC6-202ENST00000394331 TBC1D28Q2M2D7 210 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 TMEM97Q5BJF2 176 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 Q6P435 159 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 Q8IYB0 196 aa15.5■□□□□ 0.07
HOXC6-202ENST00000394331 PPIAL4EA0A075B759 164 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 PPIAL4CA0A0B4J2A2 164 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 PPIAL4DF5H284 164 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 PPIAL4FP0DN26 164 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 DEFB123Q8N688 67 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 ATP6V0BQ99437 205 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 RHBDL1O75783 438 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 HTR1DP28221 377 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 BRWD1-AS2P59051 145 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 RPL8P62917 257 aaKnown RBP15.49■□□□□ 0.07
HOXC6-202ENST00000394331 GDF5OSQ5U4N7 250 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 NPFFR1Q9GZQ6 430 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 POLDIP2Q9Y2S7 368 aa15.49■□□□□ 0.07
HOXC6-202ENST00000394331 RTL8BQ17RB0 113 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 DEFB127Q9H1M4 99 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 GNG7O60262 68 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 SMPD2O60906 423 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 DPF1Q92782 380 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 TRIB1Q96RU8 372 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 FNDC4Q9H6D8 234 aaPredicted RBP15.48■□□□□ 0.07
HOXC6-202ENST00000394331 JKAMPQ9P055 326 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 TRAPPC2LQ9UL33 140 aa15.48■□□□□ 0.07
HOXC6-202ENST00000394331 TRGV5A0A0B4J1U4 118 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 IGHV1-24A0A0C4DH33 117 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 LEPROTL1O95214 131 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 BPIFA4PQ86YQ2 179 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 OR2K2Q8NGT1 345 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 OR52E5Q8NH55 327 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 H1FXQ92522 213 aaKnown RBP15.47■□□□□ 0.07
HOXC6-202ENST00000394331 C5orf30Q96GV9 206 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 GRAMD2BQ96HH9 432 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 CLCF1Q9UBD9 225 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 TMEM189A5PLL7 270 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 MFAP2P55001 183 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 SPATA31B1PQ5VZV4 182 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 NHLRC2Q8NBF2 726 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 JMJD8Q96S16 334 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 SIGMAR1Q99720 223 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 SSBP4Q9BWG4 385 aaPredicted RBP15.47■□□□□ 0.07
HOXC6-202ENST00000394331 PSMB11A5LHX3 300 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 C17orf98A8MV24 154 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 SCGB2A2Q13296 93 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 GABRA6Q16445 453 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 SERTAD4Q9NUC0 356 aa15.47■□□□□ 0.07
HOXC6-202ENST00000394331 TECTAO75443 2155 aa15.46■□□□□ 0.07
HOXC6-202ENST00000394331 RBMXL2O75526 392 aaKnown RBP15.46■□□□□ 0.07
HOXC6-202ENST00000394331 FOXH1O75593 365 aa15.46■□□□□ 0.07
HOXC6-202ENST00000394331 SPINK2P20155 84 aa15.46■□□□□ 0.07
HOXC6-202ENST00000394331 BHLHA15Q7RTS1 189 aaPredicted RBP15.46■□□□□ 0.07
HOXC6-202ENST00000394331 STPG3Q8N7X2 389 aa15.46■□□□□ 0.07
HOXC6-202ENST00000394331 C1orf159Q96HA4 380 aa15.46■□□□□ 0.07
HOXC6-202ENST00000394331 A0A1B0GXF2 115 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 LIPFP07098 398 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 AZU1P20160 251 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 PLA2G2CQ5R387 149 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 WFDC12Q8WWY7 111 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 MAP1LC3CQ9BXW4 147 aa15.46■□□□□ 0.06
HOXC6-202ENST00000394331 ZNF841Q6ZN19 808 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 NUP35Q8NFH5 326 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 CDX4O14627 284 aaPredicted RBP15.45■□□□□ 0.06
HOXC6-202ENST00000394331 OR2H2O95918 312 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 HIST1H1EP10412 219 aaKnown RBP15.45■□□□□ 0.06
HOXC6-202ENST00000394331 ERVK11-1P61568 191 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 SPINK9Q5DT21 86 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 OR10AG1Q8NH19 301 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 SPRR3Q9UBC9 169 aa15.45■□□□□ 0.06
HOXC6-202ENST00000394331 ZNF407Q9C0G0 2248 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 VDAC2P45880 294 aaPredicted RBP15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PLP1P60201 277 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PRR20EP86478 221 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PRR20CP86479 221 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PRR20DP86480 221 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PRR20BP86481 221 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 PRR20AP86496 221 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 ZNF766Q5HY98 468 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 LINC01545Q5VT33 79 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 DHRS13Q6UX07 377 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 TMEM178AQ8NBL3 297 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 VSTM2AQ8TAG5 236 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 A0A1W2PRE2 83 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 TEPPQ6URK8 271 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 WDR82Q6UXN9 313 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 WDR86Q86TI4 376 aa15.44■□□□□ 0.06
HOXC6-202ENST00000394331 DNAJC13O75165 2243 aa15.43■□□□□ 0.06
HOXC6-202ENST00000394331 FNDC10F2Z333 226 aa15.43■□□□□ 0.06
HOXC6-202ENST00000394331 C3orf80F5H4A9 247 aa15.43■□□□□ 0.06
HOXC6-202ENST00000394331 MGST1P10620 155 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms