RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 EBLN2Q6P2I7 272 aa8.21□□□□□ -1.09
PSEN1-204ENST00000394164 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.09
PSEN1-204ENST00000394164 SSBP3Q9BWW4 388 aaPredicted RBP8.21□□□□□ -1.09
PSEN1-204ENST00000394164 ZNF430Q9H8G1 570 aaPredicted RBP8.21□□□□□ -1.09
PSEN1-204ENST00000394164 TRAV17A0A0B4J275 112 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 IGHV1-18A0A0C4DH31 117 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 TMEM30CPA0ZSE6 113 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 IQCF6A8MYZ5 107 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 HSBP1O75506 76 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 INO80CQ6PI98 192 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-204ENST00000394164 LINC00596Q86U02 117 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 MUC15Q8N387 334 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 STPG3Q8N7X2 389 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 TNCP24821 2201 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.21□□□□□ -1.1
PSEN1-204ENST00000394164 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 ACTL6BO94805 426 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 ZNF146Q15072 292 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 CLUHP3Q96NS8 147 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 SFXN3Q9BWM7 321 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 LIN7CQ9NUP9 197 aaKnown RBP8.21□□□□□ -1.1
PSEN1-204ENST00000394164 PROCRQ9UNN8 238 aa8.21□□□□□ -1.1
PSEN1-204ENST00000394164 LRBAP50851 2863 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 TRAV9-2A0A087WT02 112 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 TCTAP57738 103 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 PSG9Q00887 426 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 DUX4L9Q6RFH8 374 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-204ENST00000394164 ACP7Q6ZNF0 438 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 Q8IYB0 196 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 CD177Q8N6Q3 437 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 GNG12Q9UBI6 72 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 DKK4Q9UBT3 224 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 CDC42EP3Q9UKI2 254 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 LINC00473A8K010 186 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-204ENST00000394164 K7ERU9 68 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 CIDEAO60543 219 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 SLAQ13239 276 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 ZNF718Q3SXZ3 478 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 C16orf54Q6UWD8 224 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 ZCCHC24Q8N2G6 241 aaKnown RBP8.2□□□□□ -1.1
PSEN1-204ENST00000394164 PMCHL2Q9BQD1 86 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 SSBP4Q9BWG4 385 aaPredicted RBP8.2□□□□□ -1.1
PSEN1-204ENST00000394164 GCM1Q9NP62 436 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 V9GYV3 84 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 SVEP1Q4LDE5 3571 aa8.2□□□□□ -1.1
PSEN1-204ENST00000394164 A0A087X0K7 114 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 TRAV8-6A0A0B4J262 113 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PMS2P5A8MQ11 134 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 IGKV3-15P01624 115 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CD24P25063 80 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 UQCRFS1P47985 274 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PPOXP50336 477 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 SRSF7Q16629 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PDLIM3Q53GG5 364 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CENPWQ5EE01 88 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 C22orf34Q6ZV56 151 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 SEM1Q6ZVN7 128 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 BHLHA15Q7RTS1 189 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 MOGAT3Q86VF5 341 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 GNB1LQ9BYB4 327 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CXXC4Q9H2H0 198 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 COL6A6A6NMZ7 2263 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 ABCA1O95477 2261 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 TRBV6-6A0A0A6YYG2 114 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 IGHG3P01860 377 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 APCSP02743 223 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 USF1P22415 310 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 RPL39P5Q59GN2 51 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 TMEM108Q6UXF1 575 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PIP4P1Q86T03 277 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 OR8B2Q96RD0 313 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 LRRC30A6NM36 301 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PRR33A8MZF0 331 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 FCGR3BO75015 233 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 NPY1RP25929 384 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CRYBB3P26998 211 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CD1BP29016 333 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 PRDX2P32119 198 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 BRWD1-AS2P59051 145 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 RPL8P62917 257 aaKnown RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 LINC00173Q6ZV60 143 aa8.19□□□□□ -1.1
PSEN1-204ENST00000394164 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 MBNL3Q9NUK0 354 aaKnown RBP8.19□□□□□ -1.1
PSEN1-204ENST00000394164 CSMD1Q96PZ7 3565 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 HCFC1P51610 2035 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 KLK10O43240 276 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 CGAP01215 116 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 GNG4P50150 75 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 UBE2G1P62253 170 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 FAM27E3Q08E93 113 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 FOXE3Q13461 319 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 LRRC10Q5BKY1 277 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 MOB1BQ7L9L4 216 aa8.18□□□□□ -1.1
PSEN1-204ENST00000394164 ZNF645Q8N7E2 425 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms