RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 FOXC2Q99958 501 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 IFI27P40305 119 aaPredicted RBP13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 ZNF585BQ52M93 769 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 ZNF257Q9Y2Q1 563 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 NRXN2Q9P2S2 1712 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 MUC21Q5SSG8 566 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 C3orf36Q3SXR2 165 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 LINC00469Q8N7U9 141 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 PLSCR4Q9NRQ2 329 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 PINLYPA6NC86 204 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 ORMDL3Q8N138 153 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 BEND2Q8NDZ0 799 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 OR9G4Q8NGQ1 327 aa13.47□□□□□ -0.25
TFAP2B-202ENST00000393655 TMEM50AO95807 157 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 EGR1P18146 543 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 IFITM3Q01628 133 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 TTC9CQ8N5M4 171 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 C11orf44Q8N8P7 122 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 TRAV9-1A0A075B6T8 112 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 A0A1B0GTI1 187 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 CSRP3P50461 194 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 KIR3DL3Q8N743 410 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 ST6GALNAC3Q8NDV1 305 aa13.46□□□□□ -0.25
TFAP2B-202ENST00000393655 C1QTNF9BB2RNN3 333 aa13.46□□□□□ -0.26
TFAP2B-202ENST00000393655 FOXA3P55318 350 aaPredicted RBP13.46□□□□□ -0.26
TFAP2B-202ENST00000393655 DEFB121Q5J5C9 76 aa13.46□□□□□ -0.26
TFAP2B-202ENST00000393655 WFIKKN1Q96NZ8 548 aa13.46□□□□□ -0.26
TFAP2B-202ENST00000393655 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 SOD3P08294 240 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 PRB3Q04118 309 aaPredicted RBP13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 MINOS1Q5TGZ0 78 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 VCX2Q9H322 139 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 MINOS1-NBL1R4GNA1 71 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 OOSP1A8MZH6 123 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 PRADC1Q9BSG0 188 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 MRPL16Q9NX20 251 aaKnown RBP13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 TSPAN13O95857 204 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 CD33P20138 364 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 CBLN1P23435 193 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 CD24P25063 80 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 FHITP49789 147 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 TTC32Q5I0X7 151 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 SIGLEC15Q6ZMC9 328 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 GTF3AQ92664 365 aaKnown RBP13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 RTBDNQ9BSG5 229 aaPredicted RBP13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 IZUMO1RA6ND01 250 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 MUC21A0A0G2JKD1 596 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 MUC21A0A140T8X8 626 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 SLC25A16P16260 332 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 SSC4DQ8WTU2 575 aa13.45□□□□□ -0.26
TFAP2B-202ENST00000393655 BRWD1Q9NSI6 2320 aa13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 IGFBP3P17936 291 aaPredicted RBP13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 ZCCHC24Q8N2G6 241 aaKnown RBP13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 NXT2Q9NPJ8 142 aaKnown RBP13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 ERVK11-1P61568 191 aa13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 DTX1Q86Y01 620 aa13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 ZNF646O15015 1829 aaPredicted RBP13.44□□□□□ -0.26
TFAP2B-202ENST00000393655 CCL1P22362 96 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 BRWD3Q6RI45 1802 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 PRCDQ00LT1 54 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 ZNF525Q8N782 197 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 SDHCQ99643 169 aaPredicted RBP13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 IGHV2-26A0A0B4J1V2 119 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 FOXF2Q12947 444 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 TMEM190Q8WZ59 177 aa13.43□□□□□ -0.26
TFAP2B-202ENST00000393655 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 NAT1P18440 290 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 C18orf12Q96KH6 178 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 SLC17A3O00476 420 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 ATP5G3P48201 142 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 FLVCR1-AS1Q8TAF5 88 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 LYZL4Q96KX0 146 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 RNF114Q9Y508 228 aa13.42□□□□□ -0.26
TFAP2B-202ENST00000393655 ADARB2-AS1A8MUL3 147 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 ATOH7Q8N100 152 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 DPRXA6NFQ7 191 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 SCN10AQ9Y5Y9 1956 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 KNTC1P50748 2209 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 UNC13CQ8NB66 2214 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 NDUFA3O95167 84 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 TPTE2P1Q5T6R2 138 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 LINC01356Q8N9X3 169 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 SRSF1Q07955 248 aaKnown RBP eCLIP13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 RNF5Q99942 180 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 EPDR1Q9UM22 224 aa13.41□□□□□ -0.26
TFAP2B-202ENST00000393655 M0R1W7 72 aa13.4□□□□□ -0.26
TFAP2B-202ENST00000393655 RP1L1Q8IWN7 2480 aaPredicted RBP13.4□□□□□ -0.26
TFAP2B-202ENST00000393655 RNF166Q96A37 237 aaPredicted RBP13.4□□□□□ -0.26
TFAP2B-202ENST00000393655 NEUROG3Q9Y4Z2 214 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms