RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 S100PP25815 95 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 MIR17HGQ75NE6 70 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 DTX2Q86UW9 622 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 OR5B12Q96R08 314 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 TNCP24821 2201 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 A0A1W2PPI3 338 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 SRP14P37108 136 aaKnown RBP11.5□□□□□ -0.57
MKS1-203ENST00000393120 TAS2R45P59539 299 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 PSG5Q15238 335 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 C10orf55Q5SWW7 151 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 TCEAL7Q9BRU2 100 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
MKS1-203ENST00000393120 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 SIGLEC9Q9Y336 463 aa11.5□□□□□ -0.57
MKS1-203ENST00000393120 IGLC7A0M8Q6 106 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 PSMB11A5LHX3 300 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 PHOX2AO14813 284 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 PPP1R2P9O14990 202 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 TRGC2P03986 189 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 HOXA5P20719 270 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 GALR1P47211 349 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 MEOX2P50222 304 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 IMMP2LQ96T52 175 aa11.49□□□□□ -0.57
MKS1-203ENST00000393120 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
MKS1-203ENST00000393120 IGHV3-72A0A0B4J1Y9 119 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 CRYGCP07315 174 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SOD3P08294 240 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SELENOTP62341 195 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 PAX2Q02962 417 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SSX2Q16385 188 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 OR11H6Q8NGC7 330 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 RPEQ96AT9 228 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SLC25A33Q9BSK2 321 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 DERL1Q9BUN8 251 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SRD5A3Q9H8P0 318 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 LY96Q9Y6Y9 160 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 C22orf46C9J442 243 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 M0R1W7 72 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BKO60814 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 GGCTO75223 188 aaKnown RBP11.48□□□□□ -0.57
MKS1-203ENST00000393120 ACTL6BO94805 426 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BJP06899 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BOP23527 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BBP33778 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 RPL27AP46776 148 aaKnown RBP11.48□□□□□ -0.57
MKS1-203ENST00000393120 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BDP58876 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BCP62807 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST2H2BEQ16778 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.48□□□□□ -0.57
MKS1-203ENST00000393120 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BHQ93079 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 ACY3Q96HD9 319 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 C12orf57Q99622 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BNQ99877 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 HIST1H2BMQ99879 126 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
MKS1-203ENST00000393120 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 GATA2P23769 480 aaPredicted RBP11.47□□□□□ -0.57
MKS1-203ENST00000393120 PPP1R27Q86WC6 154 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 TRBV20OR9-2A0A075B6H5 130 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 IGKV1D-37A0A075B6S9 117 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 C9JCJ5 164 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 COX7A1P24310 79 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 DLX1P56177 255 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 LY6DQ14210 128 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 PFDN5Q99471 154 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
MKS1-203ENST00000393120 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
MKS1-203ENST00000393120 ANKHD1Q8IWZ3 2542 aaKnown RBP11.46□□□□□ -0.57
MKS1-203ENST00000393120 IGF2RP11717 2491 aa11.46□□□□□ -0.57
MKS1-203ENST00000393120 A0A1W2PRE2 83 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 CORTO00230 105 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 LY6HO94772 140 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 TYMSP04818 313 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 CDX1P47902 265 aaPredicted RBP11.46□□□□□ -0.58
MKS1-203ENST00000393120 LCN2P80188 198 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 TNXAQ16473 311 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 TPTE2P1Q5T6R2 138 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 KCNIP4Q6PIL6 250 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 OR1L4Q8NGR5 311 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 OR2T10Q8NGZ9 312 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 MALRD1Q5VYJ5 2156 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 SPTA1P02549 2419 aa11.46□□□□□ -0.58
MKS1-203ENST00000393120 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
MKS1-203ENST00000393120 CNTFRP26992 372 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms