RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TNCP24821 2201 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 SAA2-SAA4A0A096LPE2 208 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 CA2P00918 260 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 SAA2P0DJI9 122 aaPredicted RBP8.73□□□□□ -1.01
CALD1-203ENST00000393118 GATA2P23769 480 aaPredicted RBP8.73□□□□□ -1.01
CALD1-203ENST00000393118 CDKN1BP46527 198 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 A0A1B0GV72 72 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 PGPEP1LA6NFU8 196 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 TMEM238C9JI98 176 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 CXorf1O96002 111 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 PLAUP00749 431 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 RPEL1Q2QD12 228 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 OR5B3Q8NH48 314 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 BLNKQ8WV28 456 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 EXPH5Q8NEV8 1989 aa8.73□□□□□ -1.01
CALD1-203ENST00000393118 ANKHD1Q8IWZ3 2542 aaKnown RBP8.73□□□□□ -1.01
CALD1-203ENST00000393118 KBTBD11-OT1A0A1B0GTJ5 212 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 MYOD1P15172 320 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 GNG4P50150 75 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 OCIAD2Q56VL3 154 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 OR8I2Q8N0Y5 310 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 ORAOV1Q8WV07 137 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 NCOR1P1Q9H4R4 102 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.72□□□□□ -1.01
CALD1-203ENST00000393118 SNAI2O43623 268 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 PDE6DO43924 150 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 UBE2L3P68036 154 aaKnown RBP8.72□□□□□ -1.01
CALD1-203ENST00000393118 BSPH1Q075Z2 132 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 TNXAQ16473 311 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 TMEM14EPQ6UXP3 125 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 FAM90A1Q86YD7 464 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 CST9LQ9H4G1 147 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 GSX1Q9H4S2 264 aaPredicted RBP8.72□□□□□ -1.01
CALD1-203ENST00000393118 ONECUT1Q9UBC0 465 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 ZNF835Q9Y2P0 537 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 NPIPB11E5RHQ5 1161 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 GOSR1O95249 250 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 CD3EP07766 207 aa8.72□□□□□ -1.01
CALD1-203ENST00000393118 REG1AP05451 166 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 SRIP30626 198 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 UBE2G1P62253 170 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 HCP5Q6MZN7 132 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 HAPLN4Q86UW8 402 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 STPG3Q8N7X2 389 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 NRN1Q9NPD7 142 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 ZNRD1Q9P1U0 126 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 FAM157AC9JC47 383 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 SLC17A3O00476 420 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 DUX4L9Q6RFH8 374 aaPredicted RBP8.71□□□□□ -1.01
CALD1-203ENST00000393118 TIMM9Q9Y5J7 89 aa8.71□□□□□ -1.01
CALD1-203ENST00000393118 SLC25A17O43808 307 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 YPEL1O60688 119 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 MPDU1O75352 247 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 IGHV1-46P01743 117 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
CALD1-203ENST00000393118 FAM87AP0C7U9 286 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 IGFBP2P18065 325 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 MBNL2Q5VZF2 373 aaKnown RBP8.71□□□□□ -1.02
CALD1-203ENST00000393118 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 MBD3L1Q8WWY6 194 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 RPEQ96AT9 228 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 SNRNP40Q96DI7 357 aaKnown RBP8.71□□□□□ -1.02
CALD1-203ENST00000393118 DAZAP1Q96EP5 407 aaKnown RBP8.71□□□□□ -1.02
CALD1-203ENST00000393118 YPEL2Q96QA6 119 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
CALD1-203ENST00000393118 COX11Q9Y6N1 276 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 TMEM250H0YL14 139 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 BMI1P35226 326 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 PRSS8Q16651 343 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 FAM90A2PQ658T7 463 aa8.71□□□□□ -1.02
CALD1-203ENST00000393118 C1QTNF9P0C862 333 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 SCGB2A2Q13296 93 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 FAM57AQ8TBR7 257 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.7□□□□□ -1.027e-6■■■□□ 17.4
CALD1-203ENST00000393118 FCER1GP30273 86 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 RPL8P62917 257 aaKnown RBP8.7□□□□□ -1.02
CALD1-203ENST00000393118 LCN12Q6JVE5 192 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 PRR7Q8TB68 274 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 COL5A1P20908 1838 aaPredicted RBP8.7□□□□□ -1.02
CALD1-203ENST00000393118 PLA2G5P39877 138 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 RND2P52198 227 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 C11orf53Q8IXP5 236 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 C20orf144Q9BQM9 153 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
CALD1-203ENST00000393118 PTPRQQ9UMZ3 2332 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 HELTA6NFD8 242 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 IGKV1D-33P01593 117 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 IGKV1-33P01594 117 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 CT45A1Q5HYN5 189 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 CT45A3Q8NHU0 189 aa8.69□□□□□ -1.02
CALD1-203ENST00000393118 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms