RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 NCOR1O75376 2440 aa9.29□□□□□ -0.92
PDCD4-202ENST00000393104 SH2D7A6NKC9 451 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 CATR1Q13166 79 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 GUSBP1Q15486 140 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 NHLRC2Q8NBF2 726 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 ALKBH7Q9BT30 221 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 ITGB1BP1O14713 200 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 TAX1BP3O14907 124 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 AMY1AP04745 511 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 MYCNOSP40205 109 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 SELENOVP59797 346 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 MRPL54Q6P161 138 aaKnown RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 IDI2-AS1Q9NZ38 188 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 MRPL27Q9P0M9 148 aaKnown RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 SLC25A10Q9UBX3 287 aaPredicted RBP9.28□□□□□ -0.92
PDCD4-202ENST00000393104 HELTA6NFD8 242 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 ZNF785A8K8V0 405 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 M0QZ24 198 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 CD24P25063 80 aa9.28□□□□□ -0.92
PDCD4-202ENST00000393104 TRAV5A0A0B4J249 113 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 E7EUB6 86 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 CORTO00230 105 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 RAC2P15153 192 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 MEOX1P50221 254 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 SUMO1P63165 101 aaKnown RBP9.27□□□□□ -0.92
PDCD4-202ENST00000393104 C17orf58Q2M2W7 97 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 FAM216AQ8WUB2 273 aa9.27□□□□□ -0.92
PDCD4-202ENST00000393104 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.92
PDCD4-202ENST00000393104 MGAQ8IWI9 3026 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 TEPPQ6URK8 271 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 NUP35Q8NFH5 326 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 LEAP2Q969E1 77 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 SSBP3Q9BWW4 388 aaPredicted RBP9.27□□□□□ -0.93
PDCD4-202ENST00000393104 GAL3ST2Q9H3Q3 398 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 ZNF586Q9NXT0 402 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 F2RL2O00254 374 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 ACTL6BO94805 426 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 WT1P19544 449 aaPredicted RBP9.27□□□□□ -0.93
PDCD4-202ENST00000393104 GABRA2P47869 451 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 GABRA6Q16445 453 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
PDCD4-202ENST00000393104 IZUMO1RA6ND01 250 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 OR2J3O76001 311 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 MT-ND6P03923 174 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 GPR6P46095 362 aaPredicted RBP9.26□□□□□ -0.93
PDCD4-202ENST00000393104 GNG4P50150 75 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 RPL8P62917 257 aaKnown RBP9.26□□□□□ -0.93
PDCD4-202ENST00000393104 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 LEMD1Q68G75 181 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 OR4A47Q6IF82 309 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 DUX4L9Q6RFH8 374 aaPredicted RBP9.26□□□□□ -0.93
PDCD4-202ENST00000393104 ERASQ7Z444 233 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 CACNA1GO43497 2377 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 IGHV1-69-2A0A0G2JMI3 117 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 CGB1A6NKQ9 187 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 J3QW42 95 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 PSG5Q15238 335 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 PATE2Q6UY27 113 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 NABP2Q9BQ15 211 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 FAM234AQ9H0X4 552 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 AHCTF1Q8WYP5 2266 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 C22orf15Q8WYQ4 148 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
PDCD4-202ENST00000393104 ZNRD1Q9P1U0 126 aa9.26□□□□□ -0.93
PDCD4-202ENST00000393104 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 C20orf202A1L168 122 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 LTC4SQ16873 150 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 ARL6IP6Q8N6S5 226 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 OR9G1Q8NH87 305 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 SLC25A33Q9BSK2 321 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
PDCD4-202ENST00000393104 NKX2-8O15522 239 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 IGKV3-15P01624 115 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 PLP2Q04941 152 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 PMCHL1Q16048 86 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 MSRB2Q9Y3D2 182 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 IGKV1D-37A0A075B6S9 117 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 TRAV17A0A0B4J275 112 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 FCN3O75636 299 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 PPBPP02775 128 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
PDCD4-202ENST00000393104 IBA57Q5T440 356 aaKnown RBP9.25□□□□□ -0.93
PDCD4-202ENST00000393104 PRAMEF5Q5TYX0 476 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 C19orf35Q6ZS72 473 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 SLC24A4Q8NFF2 622 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 SNRNP40Q96DI7 357 aaKnown RBP9.25□□□□□ -0.93
PDCD4-202ENST00000393104 ZC2HC1AQ96GY0 325 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
PDCD4-202ENST00000393104 MRPL36Q9P0J6 103 aaKnown RBP9.25□□□□□ -0.93
PDCD4-202ENST00000393104 ASH1LQ9NR48 2969 aaKnown RBP9.24□□□□□ -0.93
PDCD4-202ENST00000393104 KNTC1P50748 2209 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 FNDC10F2Z333 226 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 FBLN7Q53RD9 439 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 GTSF1Q8WW33 167 aa9.24□□□□□ -0.93
PDCD4-202ENST00000393104 IL19Q9UHD0 177 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms