RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 SNCAP37840 140 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 WT1-ASQ06250 92 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 BSXQ3C1V8 233 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 TMEM182Q6ZP80 229 aaPredicted RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 OR5R1Q8NH85 324 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 LRRC20Q8TCA0 184 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 RNF141Q8WVD5 230 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 SRSF12Q8WXF0 261 aaKnown RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 CXorf58Q96LI9 332 aa10.75□□□□□ -0.69
PTN-202ENST00000393083 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 WDR61Q9GZS3 305 aaKnown RBP10.75□□□□□ -0.69
PTN-202ENST00000393083 IGLC7A0M8Q6 106 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 SMCO3A2RU48 225 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 H3BUX3 64 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 CNIH1O95406 144 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 OR13C7P0DN81 318 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 SULT1A2P50226 295 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 ATP5IP56385 69 aaPredicted RBP10.74□□□□□ -0.69
PTN-202ENST00000393083 DLK1P80370 383 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 VWC2Q2TAL6 325 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 OR2G3Q8NGZ4 309 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 RFNGQ9Y644 331 aa10.74□□□□□ -0.69
PTN-202ENST00000393083 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 ZNF705EA8MWA4 302 aaPredicted RBP10.73□□□□□ -0.69
PTN-202ENST00000393083 FGF16O43320 207 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 REG1AP05451 166 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 FGF7P21781 194 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 ABHD5Q8WTS1 349 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 TAF15Q92804 592 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTN-202ENST00000393083 RSG1Q9BU20 258 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 GGACTQ9BVM4 153 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 COL6A5A8TX70 2615 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 BTBD17A6NE02 478 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 FAM181BA6NEQ2 426 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 TEX22C9J3V5 150 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 APELAP0DMC3 54 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 AREGP15514 252 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTN-202ENST00000393083 Q8N9W7 124 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 P2RX4Q99571 388 aa10.73□□□□□ -0.69
PTN-202ENST00000393083 FXYD3Q14802 87 aa10.72□□□□□ -0.69
PTN-202ENST00000393083 HSD17B13Q7Z5P4 300 aaPredicted RBP10.72□□□□□ -0.69
PTN-202ENST00000393083 COMMD7Q86VX2 200 aa10.72□□□□□ -0.69
PTN-202ENST00000393083 ZNF114Q8NC26 417 aa10.72□□□□□ -0.69
PTN-202ENST00000393083 SRSF8Q9BRL6 282 aaKnown RBP10.72□□□□□ -0.69
PTN-202ENST00000393083 PSMG3Q9BT73 122 aaPredicted RBP10.72□□□□□ -0.69
PTN-202ENST00000393083 WDR83OSQ9Y284 106 aa10.72□□□□□ -0.69
PTN-202ENST00000393083 A6NDX4 124 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 PRH1P02810 166 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 RAB5CP51148 216 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
PTN-202ENST00000393083 AKR1C1Q04828 323 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 LY6EQ16553 131 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 ARSJQ5FYB0 599 aaPredicted RBP10.71□□□□□ -0.69
PTN-202ENST00000393083 AKR1C8PQ5T2L2 129 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 BTNL8Q6UX41 500 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 Q6ZRG5 221 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 ARPC1AQ92747 370 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 SAT2Q96F10 170 aaPredicted RBP10.71□□□□□ -0.69
PTN-202ENST00000393083 RASL11BQ9BPW5 248 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 SLC25A33Q9BSK2 321 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 PFDN2Q9UHV9 154 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 FBXO7Q9Y3I1 522 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 TIMM9Q9Y5J7 89 aa10.71□□□□□ -0.69
PTN-202ENST00000393083 TMEM89A2RUT3 159 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 UMAD1C9J7I0 102 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 FNDC10F2Z333 226 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 HLA-DRB1P01911 266 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 MDKP21741 143 aaPredicted RBP10.7□□□□□ -0.7
PTN-202ENST00000393083 CAMLGP49069 296 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 CD69Q07108 199 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 RNASEH2CQ8TDP1 164 aaKnown RBP10.7□□□□□ -0.7
PTN-202ENST00000393083 FAM103A1Q9BTL3 118 aaKnown RBP10.7□□□□□ -0.7
PTN-202ENST00000393083 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 MOB4Q9Y3A3 225 aa10.7□□□□□ -0.7
PTN-202ENST00000393083 C17orf112F2Z3M2 114 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 TEX46H3BTG2 121 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 CX3CL1P78423 397 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 NDPQ00604 133 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 PXDC1Q5TGL8 231 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 C19orf35Q6ZS72 473 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 SLC16A13Q7RTY0 426 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 ZNF709Q8N972 641 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 FAM213BQ8TBF2 198 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 RBM14Q96PK6 669 aaKnown RBP10.69□□□□□ -0.7
PTN-202ENST00000393083 PARP11Q9NR21 331 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
PTN-202ENST00000393083 F11RQ9Y624 299 aaKnown RBP10.69□□□□□ -0.7
PTN-202ENST00000393083 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms