RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 NKX6-2Q9C056 277 aaPredicted RBP17.04■□□□□ 0.32
SPHK1-202ENST00000392496 GNG13Q9P2W3 67 aa17.04■□□□□ 0.32
SPHK1-202ENST00000392496 IFNA1P01562 189 aa17.03■□□□□ 0.32
SPHK1-202ENST00000392496 B2MP61769 119 aa17.03■□□□□ 0.32
SPHK1-202ENST00000392496 SLC45A2Q9UMX9 530 aa17.03■□□□□ 0.32
SPHK1-202ENST00000392496 WNK2Q9Y3S1 2297 aa17.03■□□□□ 0.32
SPHK1-202ENST00000392496 SNAPINO95295 136 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 REG1AP05451 166 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 BCL2P10415 239 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 CD24P25063 80 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 PRR20EP86478 221 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 PRR20CP86479 221 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 PRR20DP86480 221 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 PRR20BP86481 221 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 PRR20AP86496 221 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 MLANAQ16655 118 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 C5orf64Q2M2E5 130 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 STPG3Q8N7X2 389 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 SSMEM1Q8WWF3 244 aa17.02■□□□□ 0.32
SPHK1-202ENST00000392496 NPFFO15130 113 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 SRP19P09132 144 aaKnown RBP17.02■□□□□ 0.31
SPHK1-202ENST00000392496 AREGP15514 252 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 SAA4P35542 130 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 TMEM249Q2WGJ8 235 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 GCSAMLQ5JQS6 135 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 OR1P1Q8NH06 330 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 RXFP4Q8TDU9 374 aa17.02■□□□□ 0.31
SPHK1-202ENST00000392496 FNDC4Q9H6D8 234 aaPredicted RBP17.02■□□□□ 0.31
SPHK1-202ENST00000392496 CRYBG3Q68DQ2 2970 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 PLXNB1O43157 2135 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 IGKV1OR2-108A0A075B7D4 117 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 SLC25A16P16260 332 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 ETFRF1Q6IPR1 90 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 RBMS3Q6XE24 437 aaKnown RBP17.01■□□□□ 0.31
SPHK1-202ENST00000392496 TACC2O95359 2948 aa17.01■□□□□ 0.31
SPHK1-202ENST00000392496 CENPVL3A0A0U1RRI6 287 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 A0A1W2PPV4 95 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 ZFP92A6NM28 416 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 EIF3GO75821 320 aaKnown RBP eCLIP17■□□□□ 0.31
SPHK1-202ENST00000392496 CNIH1O95406 144 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 LINC00869P0C866 280 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 BRS3P32247 399 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 FBLN7Q53RD9 439 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 F11RQ9Y624 299 aaKnown RBP17■□□□□ 0.31
SPHK1-202ENST00000392496 MED13LQ71F56 2210 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 CORTO00230 105 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 HMGB3O15347 200 aaKnown RBP17■□□□□ 0.31
SPHK1-202ENST00000392496 FAM106CPP0CH98 169 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 OR10J1P30954 320 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 TAGLN2P37802 199 aaKnown RBP17■□□□□ 0.31
SPHK1-202ENST00000392496 BTN1A1Q13410 526 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 HIST2H2BCQ6DN03 193 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 OR2T6Q8NHC8 308 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 VAX2Q9UIW0 290 aa17■□□□□ 0.31
SPHK1-202ENST00000392496 CENPEQ02224 2701 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 CRYGCP07315 174 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 TMEM11P17152 192 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 MFAP2P55001 183 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 CLEC12BQ2HXU8 276 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 SOHLH1Q5JUK2 328 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 ACY3Q96HD9 319 aa16.99■□□□□ 0.31
SPHK1-202ENST00000392496 NAV3Q8IVL0 2385 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 TSPAN9O75954 239 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 DEFA4P12838 97 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 SLC35E3Q7Z769 313 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 MANBALQ9NQG1 85 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 ABCA2Q9BZC7 2435 aa16.98■□□□□ 0.31
SPHK1-202ENST00000392496 MSMBP08118 114 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 FXYD3Q14802 87 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 THAP8Q8NA92 274 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 C1RLQ9NZP8 487 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 APELAP0DMC3 54 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 PSMB3P49720 205 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 RHOBP62745 196 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 ZNF562Q6V9R5 426 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 CLRN3Q8NCR9 226 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 ABHD5Q8WTS1 349 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 MISP3Q96FF7 219 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 TMPRSS5Q9H3S3 457 aa16.97■□□□□ 0.31
SPHK1-202ENST00000392496 HECTD1Q9ULT8 2610 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 IGHV1-69DA0A0B4J2H0 117 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 NCBP2LA6PVI3 153 aaKnown RBP16.96■□□□□ 0.31
SPHK1-202ENST00000392496 NDUFS6O75380 124 aaKnown RBP16.96■□□□□ 0.31
SPHK1-202ENST00000392496 IGHV1-69P01742 117 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 STAG3L2P0CL84 134 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 STAG3L3P0CL85 134 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 NPBWR1P48145 328 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 CYP2G1PQ6ZSU1 146 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 NPIPB3Q92617 1050 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 C19orf24Q9BVV8 132 aa16.96■□□□□ 0.31
SPHK1-202ENST00000392496 B4DSR2 109 aa16.95■□□□□ 0.3
SPHK1-202ENST00000392496 CTRB1P17538 263 aa16.95■□□□□ 0.3
SPHK1-202ENST00000392496 CTRB2Q6GPI1 263 aa16.95■□□□□ 0.3
SPHK1-202ENST00000392496 CYB561D1Q8N8Q1 229 aa16.95■□□□□ 0.3
SPHK1-202ENST00000392496 CELSR2Q9HCU4 2923 aa16.95■□□□□ 0.3
SPHK1-202ENST00000392496 DNASE2O00115 360 aaPredicted RBP16.94■□□□□ 0.3
SPHK1-202ENST00000392496 FBP1P09467 338 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 FAM120AOSQ5T036 256 aa16.94■□□□□ 0.3
SPHK1-202ENST00000392496 OR1L6Q8NGR2 347 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms