RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PPP5CP53041 499 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 MFAP4P55083 255 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 HSPE1P61604 102 aaKnown RBP12.26□□□□□ -0.45
PTPRK-208ENST00000392449 CTF1Q16619 201 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 GBGT1Q8N5D6 347 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 ZNF114Q8NC26 417 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 TMEM116Q8NCL8 245 aa12.26□□□□□ -0.45
PTPRK-208ENST00000392449 FCGR2BP31994 310 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-208ENST00000392449 PIGPP57054 158 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 RELQ04864 619 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-208ENST00000392449 SP6Q3SY56 376 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 RNASE10Q5GAN6 216 aaKnown RBP12.25□□□□□ -0.45
PTPRK-208ENST00000392449 Q6ZWC4 215 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 LHFPL1Q86WI0 220 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 OR10C1Q96KK4 312 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 ABHD1Q96SE0 405 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 NXF2Q9GZY0 626 aaKnown RBP12.25□□□□□ -0.45
PTPRK-208ENST00000392449 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
PTPRK-208ENST00000392449 A0A0B4J293 547 aa12.24□□□□□ -0.45
PTPRK-208ENST00000392449 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
PTPRK-208ENST00000392449 APOHP02749 345 aaPredicted RBP12.24□□□□□ -0.45
PTPRK-208ENST00000392449 P0C879 139 aa12.24□□□□□ -0.45
PTPRK-208ENST00000392449 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
PTPRK-208ENST00000392449 A0A0G2JRQ6 117 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 ST8SIA3O43173 380 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 GNG7O60262 68 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 GABARAPO95166 117 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 BMI1P35226 326 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 AKR1C2P52895 323 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 RND3P61587 244 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 WFDC3Q8IUB2 231 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 STPG3Q8N7X2 389 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 RNF183Q96D59 192 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 MAP6D1Q9H9H5 199 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 TP53TG1Q9Y2A0 90 aa12.23□□□□□ -0.45
PTPRK-208ENST00000392449 TRAV14DV4A0A0A6YYC5 116 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 ERHP84090 104 aaKnown RBP12.22□□□□□ -0.45
PTPRK-208ENST00000392449 TNFRSF9Q07011 255 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 GPR107Q5VW38 600 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 FAAP20Q6NZ36 180 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 MZT2AQ6P582 158 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 TOMM20LQ6UXN7 152 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 SLC35G3Q8N808 338 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 LINC00476Q8WZB0 136 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 ST8SIA2Q92186 375 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 TXN2Q99757 166 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 MRPL36Q9P0J6 103 aaKnown RBP12.22□□□□□ -0.45
PTPRK-208ENST00000392449 MTFP1Q9UDX5 166 aa12.22□□□□□ -0.45
PTPRK-208ENST00000392449 KIR2DL5BA0A0G2JN68 375 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 KIR2DL5BA0A0G2JPC4 375 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 ZNF182P17025 639 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-208ENST00000392449 ETV6P41212 452 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 TRIM16LQ309B1 348 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 KIR2DL5AQ8N109 375 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 OR13C8Q8NGS7 320 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 GALNT14Q96FL9 552 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 MIXL1Q9H2W2 232 aa12.21□□□□□ -0.45
PTPRK-208ENST00000392449 A0A1B0GU03 582 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 UBE2CO00762 179 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 IFNA17P01571 189 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 RNASE2P10153 161 aaKnown RBP12.21□□□□□ -0.46
PTPRK-208ENST00000392449 MLANAQ16655 118 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 TCF24Q7RTU0 167 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 ARRDC1Q8N5I2 433 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 MARCH1Q8TCQ1 289 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 AP3S1Q92572 193 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-208ENST00000392449 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.46
PTPRK-208ENST00000392449 PUS1Q9Y606 427 aaKnown RBP eCLIP12.21□□□□□ -0.46
PTPRK-208ENST00000392449 LY6G6CO95867 125 aa12.2□□□□□ -0.46
PTPRK-208ENST00000392449 SNCAP37840 140 aa12.2□□□□□ -0.46
PTPRK-208ENST00000392449 HOXA1P49639 335 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-208ENST00000392449 Q6ZRM9 215 aa12.2□□□□□ -0.46
PTPRK-208ENST00000392449 FAM24BQ8N5W8 94 aa12.2□□□□□ -0.46
PTPRK-208ENST00000392449 FNDC4Q9H6D8 234 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-208ENST00000392449 COPZ2Q9P299 210 aa12.2□□□□□ -0.46
PTPRK-208ENST00000392449 DFFBO76075 338 aa12.19□□□□□ -0.46
PTPRK-208ENST00000392449 CD74P04233 296 aa12.19□□□□□ -0.46
PTPRK-208ENST00000392449 LEMD1Q68G75 181 aa12.19□□□□□ -0.46
PTPRK-208ENST00000392449 DUSP18Q8NEJ0 188 aa12.19□□□□□ -0.46
PTPRK-208ENST00000392449 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
PTPRK-208ENST00000392449 NUPR2A6NF83 97 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 RAB3DO95716 219 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 TMEM50AO95807 157 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 TBPP20226 339 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 UCP1P25874 307 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 NPBWR1P48145 328 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 SPCS2Q15005 226 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 PVRIGQ6DKI7 326 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 STEAP1BQ6NZ63 245 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 CEMP1Q6PRD7 247 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-208ENST00000392449 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 LHFPL5Q8TAF8 219 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 MS4A6AQ9H2W1 248 aa12.18□□□□□ -0.46
PTPRK-208ENST00000392449 VSIRQ9H7M9 311 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms