RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SPIN2BQ9BPZ2 258 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GINS4Q9BRT9 223 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 DOHHQ9BU89 302 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 RSPO3Q9BXY4 272 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 FGF23Q9GZV9 251 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TMEM126AQ9H061 195 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 DEFB129Q9H1M3 183 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 C1orf198Q9H425 327 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 BANF2Q9H503 90 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TAF9BQ9HBM6 251 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 GPR84Q9NQS5 396 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 PARP11Q9NR21 331 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 COMMD3Q9UBI1 195 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 TRAPPC2LQ9UL33 140 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 BOKQ9UMX3 212 aaPredicted RBP1.82□□□□□ -2.12
PTPRC-205ENST00000391970 ITGB4P16144 1822 aa1.82□□□□□ -2.12
PTPRC-205ENST00000391970 MYLKQ15746 1914 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 KCPQ6ZWJ8 1503 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 IGHV2-26A0A0B4J1V2 119 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 A0A0D9SFI3 127 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 A0A1W2PRS3 328 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 IGLC7A0M8Q6 106 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 C7orf77A4D0Y5 90 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 GGT3PA6NGU5 568 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 B4DEV8 164 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 FTCDNL1E5RQL4 147 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 PLPP3O14495 311 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SYNGR1O43759 233 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR7C2O60412 319 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SLC16A7O60669 478 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 HSBP1O75506 76 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MPZL1O95297 269 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 FARS2O95363 451 aaKnown RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SIX6O95475 246 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ETHE1O95571 254 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 HLA-DQA1P01909 254 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 REG1AP05451 166 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR4A8P0C604 315 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR5G3P0C626 314 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 CTSEP14091 401 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 NPY1RP25929 384 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 PSMB9P28065 219 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 S100GP29377 79 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 CD70P32970 193 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SDC2P34741 201 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MYCNOSP40205 109 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 TAS2R46P59540 309 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 CACNG7P62955 275 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 BTN3A2P78410 334 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 H3F3AP84243 136 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 PSG9Q00887 426 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 HIST1H1AQ02539 215 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 EDDM3AQ14507 147 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ELOBQ15370 118 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SSX1Q16384 188 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 HIST3H3Q16695 136 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 LTC4SQ16873 150 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 KRTAP13-3Q3SY46 172 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 CCSMST1Q4G0I0 132 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 PDZD11Q5EBL8 140 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 BCL2L15Q5TBC7 163 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR10K2Q6IF99 312 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 Q6Q795 121 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 S100A7AQ86SG5 101 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 DEFB125Q8N687 156 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 FER1L6-AS1Q8NA97 138 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF555Q8NEP9 628 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR5A1Q8NGJ0 315 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR5D16Q8NGK9 328 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR6K2Q8NGY2 324 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR6N2Q8NGY6 317 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR52P1PQ8NH57 321 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 LINC01560Q8TB33 94 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 EEF1AKMT1Q8WVE0 214 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 RXFP2Q8WXD0 754 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MS4A6EQ96DS6 147 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SMIM19Q96E16 107 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ZMYND19Q96E35 227 aaPredicted RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ADTRPQ96IZ2 230 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 OR2M4Q96R27 311 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 SIGMAR1Q99720 223 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 RNF5Q99942 180 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MRPL57Q9BQC6 102 aaKnown RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 GINS3Q9BRX5 216 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 AGMATQ9BSE5 352 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 TIMM29Q9BSF4 260 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 GGTLC1Q9BX51 225 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 PRO1933Q9H354 126 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MFSD1Q9H3U5 465 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ZNF442Q9H7R0 627 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 RPRMQ9NS64 109 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 TAS2R5Q9NYW4 299 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 DNAJC27Q9NZQ0 273 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 TNFSF18Q9UNG2 199 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 C14orf166Q9Y224 244 aaKnown RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 LAMTOR2Q9Y2Q5 125 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 UFC1Q9Y3C8 167 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 ZFC3H1O60293 1989 aaKnown RBP1.81□□□□□ -2.12
PTPRC-205ENST00000391970 DOCK9Q9BZ29 2069 aa1.81□□□□□ -2.12
PTPRC-205ENST00000391970 MIA3Q5JRA6 1907 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms