RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 MLXQ9UH92 298 aa8.58□□□□□ -1.04
IGHV4-28-201ENST00000390612 U3KQK5 164 aa8.58□□□□□ -1.04
IGHV4-28-201ENST00000390612 KMT2CQ8NEZ4 4911 aaKnown RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 IGHV3-21A0A0B4J1V1 117 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 ZNF320A2RRD8 509 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 NDUFA4O00483 81 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 RNASE2P10153 161 aaKnown RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 PYDC2Q56P42 97 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 LINC00322Q6ZN03 302 aaPredicted RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 OR52E5Q8NH55 327 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 IL22RA2Q969J5 263 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 MARC2Q969Z3 335 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 GPR146Q96CH1 333 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 RRNAD1Q96FB5 475 aaKnown RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 SCGB3A2Q96PL1 93 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 TXN2Q99757 166 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 PALMDQ9NP74 551 aa8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 MRPL27Q9P0M9 148 aaKnown RBP8.57□□□□□ -1.04
IGHV4-28-201ENST00000390612 IGHV3-35A0A0C4DH35 117 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 K7EMT4 169 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 MT-CO2P00403 227 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 IFNA17P01571 189 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 S100A5P33763 92 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 MFAP4P55083 255 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 SPCS3P61009 180 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 SPINK9Q5DT21 86 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 SGPP2Q8IWX5 399 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 TMEM61Q8N0U2 210 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 WWC2-AS2Q96NR7 200 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 SRRQ9GZT4 340 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 GAR1Q9NY12 217 aaKnown RBP8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 UFC1Q9Y3C8 167 aa8.56□□□□□ -1.04
IGHV4-28-201ENST00000390612 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 CD7P09564 240 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 FAUP35544 74 aaKnown RBP8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 AP3S2P59780 193 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 NMSQ5H8A3 153 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 TMEM268Q5VZI3 342 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 ZNF57Q68EA5 555 aaPredicted RBP8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 SLC35G3Q8N808 338 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 SDHCQ99643 169 aaPredicted RBP8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 KCNIP3Q9Y2W7 256 aa8.55□□□□□ -1.04
IGHV4-28-201ENST00000390612 DYNC2H1Q8NCM8 4307 aaKnown RBP8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 A0A0B4J2A0 478 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 C15orf62A8K5M9 175 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 SNCAP37840 140 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 Q56UQ5 140 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 SPANXN2Q5MJ10 180 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 BTNL8Q6UX41 500 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 GTSCR1Q86UQ5 136 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 OR10C1Q96KK4 312 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 NEURL2Q9BR09 285 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 FNDC4Q9H6D8 234 aaPredicted RBP8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 DAZ1Q9NQZ3 744 aaKnown RBP8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 NDUFA13Q9P0J0 144 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 CACNG5Q9UF02 275 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 SHPKQ9UHJ6 478 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 TENM2Q9NT68 2774 aa8.54□□□□□ -1.04
IGHV4-28-201ENST00000390612 CORTO00230 105 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 NUPL2O15504 423 aaKnown RBP8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 TMEM50AO95807 157 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 IGHV3-48P01763 117 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 AKR1C4P17516 323 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 SUB1P53999 127 aaKnown RBP eCLIP8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 CD81P60033 236 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 BAK1Q16611 211 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 HAGHQ16775 308 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 TMEM128Q5BJH2 165 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 LYZL2Q7Z4W2 148 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 RNASE11Q8TAA1 199 aaKnown RBP8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 TMEM170AQ8WVE7 144 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 RCHY1Q96PM5 261 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 PDCD10Q9BUL8 212 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 MRPL36Q9P0J6 103 aaKnown RBP8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 SELENOKQ9Y6D0 94 aa8.53□□□□□ -1.04
IGHV4-28-201ENST00000390612 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 TSPAN4O14817 238 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 SULT1A3P0DMM9 295 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 SULT1A4P0DMN0 295 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 HTR2BP41595 481 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 NPBWR1P48145 328 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 HOXA1P49639 335 aaPredicted RBP8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 MLANAQ16655 118 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 GUCA2BQ16661 112 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 C2orf83Q53S99 150 aa8.52□□□□□ -1.05
IGHV4-28-201ENST00000390612 LGI3Q8N145 548 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms