RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CCL20P78556 96 aa11.75□□□□□ -0.53
SNPH-201ENST00000381867 CENPVQ7Z7K6 275 aaPredicted RBP11.75□□□□□ -0.53
SNPH-201ENST00000381867 NR2C2APQ86WQ0 139 aa11.75□□□□□ -0.53
SNPH-201ENST00000381867 SPTA1P02549 2419 aa11.75□□□□□ -0.53
SNPH-201ENST00000381867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.74□□□□□ -0.53
SNPH-201ENST00000381867 M0R381 172 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 HIST1H2BLQ99880 126 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 PROB1E7EW31 1015 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 CEACAM4O75871 244 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 SNRPD3P62318 126 aaKnown RBP11.74□□□□□ -0.53
SNPH-201ENST00000381867 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
SNPH-201ENST00000381867 FOXH1O75593 365 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 C1QTNF9P0C862 333 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
SNPH-201ENST00000381867 RFPL3SP0C7P2 107 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 TRAV8-2A0A0B4J237 113 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 LINC00614P0C842 121 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 FAM181BA6NEQ2 426 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 NDUFA3O95167 84 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 TGFAP01135 160 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 GLRXP35754 106 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 ABCA7Q8IZY2 2146 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 PNKDQ8N490 385 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 C2orf88Q9BSF0 95 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 NHP2Q9NX24 153 aaKnown RBP11.73□□□□□ -0.53
SNPH-201ENST00000381867 PSMB11A5LHX3 300 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 H3BRM9 83 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 DUX5Q96PT3 197 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
SNPH-201ENST00000381867 OSTCQ9NRP0 149 aa11.73□□□□□ -0.53
SNPH-201ENST00000381867 RNASEH2CQ8TDP1 164 aaKnown RBP11.72□□□□□ -0.53
SNPH-201ENST00000381867 Q9H3A6 140 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 C9JCJ5 164 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 H0YIZ8 118 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 MPZP25189 248 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 LEPP41159 167 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 FBLN5Q9UBX5 448 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 TMEM95Q3KNT9 176 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 ORAOV1Q8WV07 137 aa11.72□□□□□ -0.53
SNPH-201ENST00000381867 MUC21A0A0G2JKD1 596 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 MUC21A0A140T8X8 626 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 APOBEC3AP31941 199 aaPredicted RBP11.71□□□□□ -0.53
SNPH-201ENST00000381867 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 SPACA3Q8IXA5 215 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 GNB1LQ9BYB4 327 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 PTPRDP23468 1912 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 IGHV3-35A0A0C4DH35 117 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 COLCA2A8K830 154 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 TM4SF5O14894 197 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 ANAPC13Q9BS18 74 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.53
SNPH-201ENST00000381867 THADAQ6YHU6 1953 aa11.71□□□□□ -0.54
SNPH-201ENST00000381867 NLRC5Q86WI3 1866 aa11.71□□□□□ -0.54
SNPH-201ENST00000381867 TMEM8BA6NDV4 472 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 CD5P06127 495 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 C1QL4Q86Z23 238 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 OR13A1Q8NGR1 328 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 SSBP4Q9BWG4 385 aaPredicted RBP11.7□□□□□ -0.54
SNPH-201ENST00000381867 ASXL3Q9C0F0 2248 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 HBDP02042 147 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 LHX2P50458 406 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 TMEM144Q7Z5S9 345 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 TNFSF13O75888 250 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 SLC25A28Q96A46 364 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 FOXA2Q9Y261 457 aaPredicted RBP11.7□□□□□ -0.54
SNPH-201ENST00000381867 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 C1QTNF5Q9BXJ0 243 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 TRBV6-7A0A0A0MS04 114 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 SEC11AP67812 179 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 GLRX5Q86SX6 157 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 NEUROG3Q9Y4Z2 214 aa11.7□□□□□ -0.54
SNPH-201ENST00000381867 NDUFS8O00217 210 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 ARTNQ5T4W7 220 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 AMBPP02760 352 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 OR2K2Q8NGT1 345 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 CHCHD1Q96BP2 118 aaKnown RBP11.69□□□□□ -0.54
SNPH-201ENST00000381867 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 RP1P56715 2156 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 ICE1Q9Y2F5 2266 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 A6NNC1 897 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 DPM2O94777 84 aa11.69□□□□□ -0.54
SNPH-201ENST00000381867 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms