RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 C5orf64Q2M2E5 130 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 FBLN7Q53RD9 439 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 KHDC3LQ587J8 217 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 STPG3Q8N7X2 389 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 OR1P1Q8NH06 330 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 SSMEM1Q8WWF3 244 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 GNG13Q9P2W3 67 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 IGKV1OR2-108A0A075B7D4 117 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 HSPB1P04792 205 aaKnown RBP17.12■□□□□ 0.33
GMDS-202ENST00000380815 CDC34P49427 236 aaPredicted RBP17.12■□□□□ 0.33
GMDS-202ENST00000380815 PRR20EP86478 221 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 PRR20CP86479 221 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 PRR20DP86480 221 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 PRR20BP86481 221 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 PRR20AP86496 221 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 ICAM4Q14773 271 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 GCSAMLQ5JQS6 135 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 ATRAIDQ6UW56 229 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 FNDC4Q9H6D8 234 aaPredicted RBP17.12■□□□□ 0.33
GMDS-202ENST00000380815 SLC45A2Q9UMX9 530 aa17.12■□□□□ 0.33
GMDS-202ENST00000380815 CHD6Q8TD26 2715 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 LOC102723971A0A1B0GUV8 181 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 CNIH1O95406 144 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 FAM106CPP0CH98 169 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 BCL2P10415 239 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 BRS3P32247 399 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 CLEC12BQ2HXU8 276 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
GMDS-202ENST00000380815 ETFRF1Q6IPR1 90 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 OR2T6Q8NHC8 308 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 F11RQ9Y624 299 aaKnown RBP17.1■□□□□ 0.33
GMDS-202ENST00000380815 A0A1W2PPV4 95 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 CORTO00230 105 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 EIF3GO75821 320 aaKnown RBP eCLIP17.1■□□□□ 0.33
GMDS-202ENST00000380815 SNAPINO95295 136 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 IFNA1P01562 189 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 MSMBP08118 114 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 TMEM11P17152 192 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 COL8A1P27658 744 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 MFAP2P55001 183 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 TMEM249Q2WGJ8 235 aa17.1■□□□□ 0.33
GMDS-202ENST00000380815 NKX6-2Q9C056 277 aaPredicted RBP17.1■□□□□ 0.33
GMDS-202ENST00000380815 ZFP92A6NM28 416 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 HMGB3O15347 200 aaKnown RBP17.09■□□□□ 0.33
GMDS-202ENST00000380815 CRYGCP07315 174 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 LINC00869P0C866 280 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 APELAP0DMC3 54 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 DEFA4P12838 97 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 RBMS3Q6XE24 437 aaKnown RBP17.09■□□□□ 0.33
GMDS-202ENST00000380815 RXFP4Q8TDU9 374 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 ACY3Q96HD9 319 aa17.09■□□□□ 0.33
GMDS-202ENST00000380815 USP9YO00507 2555 aaPredicted RBP17.09■□□□□ 0.33
GMDS-202ENST00000380815 B4DSR2 109 aa17.08■□□□□ 0.33
GMDS-202ENST00000380815 SRP19P09132 144 aaKnown RBP17.08■□□□□ 0.33
GMDS-202ENST00000380815 OR10J1P30954 320 aa17.08■□□□□ 0.33
GMDS-202ENST00000380815 FXYD3Q14802 87 aa17.08■□□□□ 0.33
GMDS-202ENST00000380815 ZNF562Q6V9R5 426 aa17.08■□□□□ 0.33
GMDS-202ENST00000380815 IGHV1-69DA0A0B4J2H0 117 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 NCBP2LA6PVI3 153 aaKnown RBP17.07■□□□□ 0.32
GMDS-202ENST00000380815 IGHV1-69P01742 117 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 C1RLQ9NZP8 487 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 TAGLN2P37802 199 aaKnown RBP17.07■□□□□ 0.32
GMDS-202ENST00000380815 BTN1A1Q13410 526 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 SOHLH1Q5JUK2 328 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 MISP3Q96FF7 219 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 VAX2Q9UIW0 290 aa17.07■□□□□ 0.32
GMDS-202ENST00000380815 FBN2P35556 2912 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 KRTAP10-9P60411 292 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 FAM120AOSQ5T036 256 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 SLC35E3Q7Z769 313 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 THAP8Q8NA92 274 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 ABHD5Q8WTS1 349 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 NPIPB3Q92617 1050 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
GMDS-202ENST00000380815 BEX4Q9NWD9 120 aaPredicted RBP17.06■□□□□ 0.32
GMDS-202ENST00000380815 TSPAN9O75954 239 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 PLA2G2AP14555 144 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 RHOBP62745 196 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 C19orf35Q6ZS72 473 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 MANBALQ9NQG1 85 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 STAG3L2P0CL84 134 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 STAG3L3P0CL85 134 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 CTRB1P17538 263 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 PSMB3P49720 205 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 CX3CL1P78423 397 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 CTRB2Q6GPI1 263 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 CYP2G1PQ6ZSU1 146 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 C19orf24Q9BVV8 132 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 DMRT1Q9Y5R6 373 aa17.05■□□□□ 0.32
GMDS-202ENST00000380815 A0A096LNT2 108 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 GATA3P23771 443 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 RND2P52198 227 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 CYB561D1Q8N8Q1 229 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 TMEM116Q8NCL8 245 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 CLRN3Q8NCR9 226 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 OR1L6Q8NGR2 347 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 C22orf15Q8WYQ4 148 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 ARPC1AQ92747 370 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 SLC25A33Q9BSK2 321 aa17.04■□□□□ 0.32
GMDS-202ENST00000380815 WNT10AQ9GZT5 417 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms