RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 NBR2O15453 112 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 C14orf144Q96I85 54 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 OTORQ9NRC9 128 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 HIGD1CA8MV81 97 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 CLEC19AQ6UXS0 136 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
COL2A1-202ENST00000380518 PSMB11A5LHX3 300 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 PF4P02776 101 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 GAS1P54826 345 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 FAM168AQ92567 244 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 A0A1B0GV90 55 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
COL2A1-202ENST00000380518 GFI1Q99684 422 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 KIF26BQ2KJY2 2108 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 FGF16O43320 207 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 CRYGSP22914 178 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 TMEM133Q9H2Q1 129 aa13.4□□□□□ -0.26
COL2A1-202ENST00000380518 IGHV3OR16-8A0A075B7F1 116 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 MUC21A0A0G2JKD1 596 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 MUC21A0A140T8X8 626 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 DNAL4O96015 105 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 MUC21Q5SSG8 566 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 TCF23Q7RTU1 214 aa13.4□□□□□ -0.27
COL2A1-202ENST00000380518 BRCA1P38398 1863 aaKnown RBP13.39□□□□□ -0.27
COL2A1-202ENST00000380518 SAMD13Q5VXD3 122 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 PVRIGQ6DKI7 326 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 RNASE6Q93091 150 aaKnown RBP13.39□□□□□ -0.27
COL2A1-202ENST00000380518 A0A1W2PRE2 83 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
COL2A1-202ENST00000380518 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
COL2A1-202ENST00000380518 MST1P26927 711 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 C7orf69Q9H7B7 122 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 A0A0A6YYD4 124 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 RAMP3O60896 148 aa13.39□□□□□ -0.27
COL2A1-202ENST00000380518 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
COL2A1-202ENST00000380518 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
COL2A1-202ENST00000380518 IGKV1D-8A0A087WSZ0 117 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
COL2A1-202ENST00000380518 FOXC2Q99958 501 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 NCOR1O75376 2440 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 CD55P08174 381 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 TMEM170AQ8WVE7 144 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 WDR83OSQ9Y284 106 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 ZNF236Q9UL36 1845 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 FAM90A9PA6NNJ1 464 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 TMEM101Q96IK0 257 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 GSN-AS1Q9NRJ2 163 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 SBF2Q86WG5 1849 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 ACACAQ13085 2346 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 C1QTNF9P0C862 333 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 PRCDQ00LT1 54 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
COL2A1-202ENST00000380518 PAX1P15863 534 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 ASCL2Q99929 193 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 SLC50A1Q9BRV3 221 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 RNASE7Q9H1E1 156 aaKnown RBP13.37□□□□□ -0.27
COL2A1-202ENST00000380518 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 ABCA1O95477 2261 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 TCRBV4S1A1TA0A5B7 111 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 SERF1AO75920 110 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 OR13C6PQ8NH95 151 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 DMRTA2Q96SC8 542 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 MRPL16Q9NX20 251 aaKnown RBP13.37□□□□□ -0.27
COL2A1-202ENST00000380518 PLXNA1Q9UIW2 1896 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 ALKBH7Q9BT30 221 aaPredicted RBP13.37□□□□□ -0.27
COL2A1-202ENST00000380518 EPDR1Q9UM22 224 aa13.37□□□□□ -0.27
COL2A1-202ENST00000380518 IGKV1-12A0A0C4DH73 117 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 TMEM262E9PQX1 116 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 NAPSAO96009 420 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 IGKV1D-12P01611 117 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 CFHR1Q03591 330 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 TMEM105Q8N8V8 129 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 NTN3O00634 580 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 CSRP1P21291 193 aaKnown RBP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 TTC32Q5I0X7 151 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 FGFBP3Q8TAT2 258 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 DUX3Q96PT4 197 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 EFNA2O43921 213 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 SRSF7Q16629 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 OR4X2Q8NGF9 303 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 MBD3L1Q8WWY6 194 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 NRN1Q9NPD7 142 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 SRSF3P84103 164 aaKnown RBP13.36□□□□□ -0.27
COL2A1-202ENST00000380518 LHFPL1Q86WI0 220 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 MESP1Q9BRJ9 268 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
COL2A1-202ENST00000380518 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 PINLYPA6NC86 204 aa13.35□□□□□ -0.27
COL2A1-202ENST00000380518 ITLN2Q8WWU7 325 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms