RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 ZNF146Q15072 292 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 LINC00596Q86U02 117 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 MOGAT3Q86VF5 341 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 C11orf53Q8IXP5 236 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 Q8IYB0 196 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 AKAP13Q12802 2813 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 C17orf112F2Z3M2 114 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 SRSF7Q16629 238 aaKnown RBP eCLIP10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 IL36BQ9NZH7 164 aa10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 TET2Q6N021 2002 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-202ENST00000380281 TRBV6-6A0A0A6YYG2 114 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 PMS2P5A8MQ11 134 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 ACP1P24666 158 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 MMD2Q8IY49 270 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 DEFB123Q8N688 67 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 SH3BGRL2Q9UJC5 107 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 DYSFO75923 2080 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 CORTO00230 105 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 PDE6DO43924 150 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 LGALS4P56470 323 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 ERVK-16P61578 105 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 PSG9Q00887 426 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 C9orf106Q8NAJ2 232 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 TSKUQ8WUA8 353 aa10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 HSD17B10Q99714 261 aaKnown RBP10.27□□□□□ -0.77
PRPF40B-202ENST00000380281 M0R1B8 84 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 CGAP01215 116 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 REG1BP48304 166 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 SELENOVP59797 346 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 RPL31P62899 125 aaKnown RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 GABRA6Q16445 453 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 TREML4Q6UXN2 200 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 C1orf229Q6ZS94 237 aaPredicted RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 DOLPP1Q86YN1 238 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 FDCSPQ8NFU4 85 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 Q8TCH9 128 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 CDC42EP3Q9UKI2 254 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 S1PR3Q99500 378 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 LRBAP50851 2863 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 ATRXP46100 2492 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 AHRRA9YTQ3 701 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 OR7C2O60412 319 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 CA7P43166 264 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 ZNF841Q6ZN19 808 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 FAM214BQ7L5A3 538 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 FER1L6-AS2Q96M78 137 aa10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
PRPF40B-202ENST00000380281 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 SMIM21Q3B7S5 101 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 OR5B3Q8NH48 314 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 MGST2Q99735 147 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 DSCAMO60469 2012 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 GNG7O60262 68 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 TOX4O94842 621 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 PLAUP00749 431 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 IGFBP2P18065 325 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 DUTP33316 252 aaKnown RBP10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 RPEL1Q2QD12 228 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 SPATA12Q7Z6I5 190 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 RPRMLQ8N4K4 120 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 TNFRSF14Q92956 283 aa10.25□□□□□ -0.77
PRPF40B-202ENST00000380281 PSG5Q15238 335 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 ZNF718Q3SXZ3 478 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 EBLN2Q6P2I7 272 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 PNKDQ8N490 385 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 OR2V2Q96R30 315 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 TAAR6Q96RI8 345 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 TIMM9Q9Y5J7 89 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 TMEM238LA0A1B0GVL6 79 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 CRYBB3P26998 211 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 MIR17HGQ75NE6 70 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 KCNIP2Q9NS61 270 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 TCF19Q9Y242 345 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 TIMM8BQ9Y5J9 83 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 KMT2EQ8IZD2 1858 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 IQCF6A8MYZ5 107 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 BMPR1BO00238 502 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 SLC35E4Q6ICL7 350 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 MDS2Q8NDY4 140 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 SSBP3Q9BWW4 388 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 ENY2Q9NPA8 101 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 MRPL27Q9P0M9 148 aaKnown RBP10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
PRPF40B-202ENST00000380281 IGKV1D-17A0A075B6S4 117 aa10.23□□□□□ -0.77
PRPF40B-202ENST00000380281 TNXAQ16473 311 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms