RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 Q8TCH9 128 aa6.73□□□□□ -1.33
PTPRR-203ENST00000378778 ZNF503Q96F45 646 aa6.73□□□□□ -1.33
PTPRR-203ENST00000378778 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
PTPRR-203ENST00000378778 TRAV34A0A0B4J273 112 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 A0A1B0GW15 77 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 PEX7O00628 323 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 PROP1O75360 226 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 PLA2G5P39877 138 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 BPIFB3P59826 476 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 FXYD3Q14802 87 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
PTPRR-203ENST00000378778 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 CSTL1Q9H114 145 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 IFI27L2Q9H2X8 130 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 OBP2BQ9NPH6 170 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 AMMECR1Q9Y4X0 333 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-203ENST00000378778 KLF12Q9Y4X4 402 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 ZNF407Q9C0G0 2248 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 USF3Q68DE3 2245 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 GRNP28799 593 aaKnown RBP6.72□□□□□ -1.33
PTPRR-203ENST00000378778 SSTR5P35346 364 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 ABHD17BQ5VST6 288 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 OR4A47Q6IF82 309 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 MED12LQ86YW9 2145 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 NUDT11Q96G61 164 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 IDI2-AS1Q9NZ38 188 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 KLF13Q9Y2Y9 288 aaPredicted RBP6.72□□□□□ -1.33
PTPRR-203ENST00000378778 PPIAL4AQ9Y536 164 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 OR51B2Q9Y5P1 312 aa6.72□□□□□ -1.33
PTPRR-203ENST00000378778 UPK2O00526 184 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 PRDX2P32119 198 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 OTX2P32243 289 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 TCL1AP56279 114 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 LOXL3P58215 753 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 SRYQ05066 204 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 CD69Q07108 199 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 FAM120AOSQ5T036 256 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 GATD1Q8NB37 220 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 OR1N2Q8NGR9 330 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 TTTY12Q9BZ98 90 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 GCM1Q9NP62 436 aa6.71□□□□□ -1.33
PTPRR-203ENST00000378778 TRBV6-1A0A0K0K1D8 114 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 PSMB11A5LHX3 300 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 LEPROTL1O95214 131 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 APOBEC3AP31941 199 aaPredicted RBP6.71□□□□□ -1.34
PTPRR-203ENST00000378778 UBE2L3P68036 154 aaKnown RBP6.71□□□□□ -1.34
PTPRR-203ENST00000378778 MBNL2Q5VZF2 373 aaKnown RBP6.71□□□□□ -1.34
PTPRR-203ENST00000378778 OR4A5Q8NH83 315 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 KLF14Q8TD94 323 aaPredicted RBP6.71□□□□□ -1.34
PTPRR-203ENST00000378778 SNRNP40Q96DI7 357 aaKnown RBP6.71□□□□□ -1.34
PTPRR-203ENST00000378778 C7orf69Q9H7B7 122 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 LINC00574Q9H8X3 128 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 WASHC3Q9Y3C0 194 aa6.71□□□□□ -1.34
PTPRR-203ENST00000378778 TET2Q6N021 2002 aaPredicted RBP6.7□□□□□ -1.34
PTPRR-203ENST00000378778 SIVA1O15304 175 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 CIDEAO60543 219 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 CGB3P0DN86 165 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 CGB7P0DN87 165 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 MPV17P39210 176 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 CXCL12P48061 93 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 MPV17L2Q567V2 206 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 LCN12Q6JVE5 192 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 ZNF329Q86UD4 541 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 H1FXQ92522 213 aaKnown RBP6.7□□□□□ -1.34
PTPRR-203ENST00000378778 FMC1Q96HJ9 113 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 PRSS22Q9GZN4 317 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 RPP21Q9H633 154 aaKnown RBP6.7□□□□□ -1.34
PTPRR-203ENST00000378778 A6NDN8 102 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 SRRM5B3KS81 715 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 KLRC4-KLRK1H3BQV0 150 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 K7ESF4 209 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 NDUFS8O00217 210 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 NUDT3O95989 172 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 MYCNOSP40205 109 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 CEBPDP49716 269 aaPredicted RBP6.7□□□□□ -1.34
PTPRR-203ENST00000378778 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 LINC01545Q5VT33 79 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 IGF2-ASQ6U949 168 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 Q6ZR03 302 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 TMEM251Q8N6I4 163 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 GPR82Q96P67 336 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 PAXXQ9BUH6 204 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 SLC25A2Q9BXI2 301 aa6.7□□□□□ -1.34
PTPRR-203ENST00000378778 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 TRAV3A0A0B4J244 114 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 HIGD1CA8MV81 97 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 SPINK4O60575 86 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 ACTL6BO94805 426 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 SMIM17P0DL12 118 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 COX8AP10176 69 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 GPR183P32249 361 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 SUB1P53999 127 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 LDLRAD2Q5SZI1 272 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
PTPRR-203ENST00000378778 THAP8Q8NA92 274 aa6.69□□□□□ -1.34
PTPRR-203ENST00000378778 CALYQ9NYX4 217 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms