RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 FMC1Q96HJ9 113 aa9.02□□□□□ -0.97
RTN3-206ENST00000377819 J3QW42 95 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 MMP23AO75900 390 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 GLIPR1P48060 266 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
RTN3-206ENST00000377819 C9orf62Q8N4C0 152 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 ZNF114Q8NC26 417 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 DLX4Q92988 240 aaPredicted RBP9.01□□□□□ -0.97
RTN3-206ENST00000377819 SCARF2Q96GP6 870 aaPredicted RBP9.01□□□□□ -0.97
RTN3-206ENST00000377819 GGACTQ9BVM4 153 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 LOXHD1Q8IVV2 1947 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 IGHV3OR16-8A0A075B7F1 116 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 TRAV14DV4A0A0A6YYC5 116 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 COL9A1P20849 921 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 TMEM155Q4W5P6 130 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 C3orf56Q8N813 242 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 IL36BQ9NZH7 164 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 S4R3C0 116 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 MYH8P13535 1937 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 PRTN3P24158 256 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 GTF3C1Q12789 2109 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 FBLN7Q53RD9 439 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 LINC01560Q8TB33 94 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 DUSP15Q9H1R2 295 aaPredicted RBP9.01□□□□□ -0.97
RTN3-206ENST00000377819 SLX4Q8IY92 1834 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 C1QTNF12Q5T7M4 302 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 SAXO1Q8IYX7 474 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 GLMPQ8WWB7 406 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 RPP25Q9BUL9 199 aaKnown RBP9.01□□□□□ -0.97
RTN3-206ENST00000377819 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
RTN3-206ENST00000377819 CD5P06127 495 aa9□□□□□ -0.97
RTN3-206ENST00000377819 ZNF876PQ49A33 203 aa9□□□□□ -0.97
RTN3-206ENST00000377819 SLC25A28Q96A46 364 aa9□□□□□ -0.97
RTN3-206ENST00000377819 CHTOPQ9Y3Y2 248 aaKnown RBP9□□□□□ -0.97
RTN3-206ENST00000377819 RLFQ13129 1914 aa9□□□□□ -0.97
RTN3-206ENST00000377819 TNCP24821 2201 aa9□□□□□ -0.97
RTN3-206ENST00000377819 IGLV3-25P01717 112 aa9□□□□□ -0.97
RTN3-206ENST00000377819 ZP4Q12836 540 aa9□□□□□ -0.97
RTN3-206ENST00000377819 NSUN5P1Q3KNT7 163 aa9□□□□□ -0.97
RTN3-206ENST00000377819 C11orf44Q8N8P7 122 aa9□□□□□ -0.97
RTN3-206ENST00000377819 TMEM174Q8WUU8 243 aa9□□□□□ -0.97
RTN3-206ENST00000377819 IGLV3-16A0A075B6K0 115 aa9□□□□□ -0.97
RTN3-206ENST00000377819 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
RTN3-206ENST00000377819 SAP30O75446 220 aa9□□□□□ -0.97
RTN3-206ENST00000377819 INAFM2P0DMQ5 153 aa9□□□□□ -0.97
RTN3-206ENST00000377819 FUT5Q11128 374 aa9□□□□□ -0.97
RTN3-206ENST00000377819 LURAP1LQ8IV03 231 aa9□□□□□ -0.97
RTN3-206ENST00000377819 CITED1Q99966 193 aa9□□□□□ -0.97
RTN3-206ENST00000377819 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
RTN3-206ENST00000377819 PATE3B3GLJ2 98 aa9□□□□□ -0.97
RTN3-206ENST00000377819 LEPROTO15243 131 aa9□□□□□ -0.97
RTN3-206ENST00000377819 SS18Q15532 418 aa9□□□□□ -0.97
RTN3-206ENST00000377819 C1orf159Q96HA4 380 aa9□□□□□ -0.97
RTN3-206ENST00000377819 SMPXQ9UHP9 88 aa9□□□□□ -0.97
RTN3-206ENST00000377819 SBF1O95248 1867 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 TFF2Q03403 129 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 PILRBQ9UKJ0 227 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 TRAV9-1A0A075B6T8 112 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 NKAPP1Q8N9T2 125 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 UBL5Q9BZL1 73 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 MED12Q93074 2177 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 IGKV1D-42A0A075B6H8 117 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 OVOL1O14753 267 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 TM4SF5O14894 197 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 CLPSP04118 112 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 HOXB3P14651 431 aaPredicted RBP8.99□□□□□ -0.97
RTN3-206ENST00000377819 MRAPQ8TCY5 172 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 FNDC4Q9H6D8 234 aaPredicted RBP8.99□□□□□ -0.97
RTN3-206ENST00000377819 WDR90Q96KV7 1748 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 A0A1W2PPC1 479 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 MSGN1A6NI15 193 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 UPK2O00526 184 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 COLCA1Q6ZS62 124 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 PRIMA1Q86XR5 153 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 A0A0G2JMZ2 1700 aa8.99□□□□□ -0.97
RTN3-206ENST00000377819 TCRBV5S1A1TA0A578 114 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 SOCS3O14543 225 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 C1QAP02745 245 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 EGR4Q05215 589 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 ZIC1Q15915 447 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 TEX43Q6ZNM6 134 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 DRAM1Q8N682 238 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.98□□□□□ -0.97
RTN3-206ENST00000377819 F2Z2F3 143 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 CELA2BP08218 269 aaPredicted RBP8.98□□□□□ -0.97
RTN3-206ENST00000377819 KIAA0040Q15053 153 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 ZNF79Q15937 498 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 MRPL52Q86TS9 123 aaKnown RBP8.98□□□□□ -0.97
RTN3-206ENST00000377819 OR11H7Q8NGC8 314 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 PLSCR4Q9NRQ2 329 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 PEX11BO96011 259 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 CGAP01215 116 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 COL4A5P29400 1685 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 EVPLQ92817 2033 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 WDYHV1Q96HA8 205 aa8.98□□□□□ -0.97
RTN3-206ENST00000377819 SPSB2Q99619 263 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms